DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30148 and SKN1

DIOPT Version :9

Sequence 1:NP_001286634.1 Gene:CG30148 / 37318 FlyBaseID:FBgn0050148 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_011659.3 Gene:SKN1 / 853045 SGDID:S000003375 Length:771 Species:Saccharomyces cerevisiae


Alignment Length:34 Identity:13/34 - (38%)
Similarity:15/34 - (44%) Gaps:12/34 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 AKRG-RW--TFRDHKTKLN-HGDTLY-----FWT 98
            ||.| :|  .|.|   :.| .|.|.|     |||
Yeast   372 AKDGSKWQLVFSD---EFNAEGRTFYDGDDQFWT 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30148NP_001286634.1 CBM39 24..124 CDD:292510 13/34 (38%)
SKN1NP_011659.3 SKN1 249..763 CDD:397841 13/34 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.