DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30148 and TCH4

DIOPT Version :10

Sequence 1:NP_665889.1 Gene:CG30148 / 37318 FlyBaseID:FBgn0050148 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_200564.1 Gene:TCH4 / 835860 AraportID:AT5G57560 Length:284 Species:Arabidopsis thaliana


Alignment Length:51 Identity:13/51 - (25%)
Similarity:16/51 - (31%) Gaps:18/51 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NEEFDGLEAGQW---SRDIPKAKRGRWTFRDHKTKLNHGDTLYFWTYVIYN 103
            |....|...|.|   ..|....:|.||..|:               |:|||
plant   230 NASKQGTTTGSWLSQELDSTAQQRMRWVQRN---------------YMIYN 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30148NP_665889.1 CBM39 24..124 CDD:464924 13/51 (25%)
TCH4NP_200564.1 GH16_XET 19..281 CDD:185685 13/51 (25%)

Return to query results.
Submit another query.