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Protein Alignment GNBP-like3 and SKN1
DIOPT Version :9
Sequence 1: | NP_611483.1 |
Gene: | GNBP-like3 / 37313 |
FlyBaseID: | FBgn0034511 |
Length: | 152 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_011659.3 |
Gene: | SKN1 / 853045 |
SGDID: | S000003375 |
Length: | 771 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 146 |
Identity: | 34/146 - (23%) |
Similarity: | 45/146 - (30%) |
Gaps: | 61/146 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 IYLFLV------------------AISVGSSLSYDVPKATVKVNSPKGFEVSI----PDEPGIS- 50
|::|:| |.|.|||.|....|:..:...|:...:.. ||.|..:
Yeast 304 IFIFIVLPAITFSGVVYHHEHVHAANSAGSSSSNTTSKSLTEYQYPQLAAIRTTLVDPDTPDSAK 368
Fly 51 ----------LFAFHGKVNEE---MDDLSDQTWAA----------------DVVSSRNGRWTYRN 86
...|..:.|.| ..|..||.|.| |.|::.||..|.|.
Yeast 369 TRVAKDGSKWQLVFSDEFNAEGRTFYDGDDQFWTAPDIHYDATKDLEWYSPDAVTTTNGTLTLRM 433
Fly 87 ---RNHQLRPGDVLYY 99
|||. |||
Yeast 434 DAFRNHD------LYY 443
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GNBP-like3 | NP_611483.1 |
CBM39 |
26..121 |
CDD:292510 |
25/111 (23%) |
SKN1 | NP_011659.3 |
SKN1 |
249..763 |
CDD:397841 |
34/146 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2273 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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