DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP-like3 and CRR1

DIOPT Version :9

Sequence 1:NP_611483.1 Gene:GNBP-like3 / 37313 FlyBaseID:FBgn0034511 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_013314.1 Gene:CRR1 / 850910 SGDID:S000004203 Length:422 Species:Saccharomyces cerevisiae


Alignment Length:102 Identity:21/102 - (20%)
Similarity:43/102 - (42%) Gaps:27/102 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VGSSLSYDVPKATVKVNSPKGFEVSIPDEPGISLFAFHGKVNEEMDDLSDQTW-AADVVSSRNGR 81
            :.|:.|:...||:|::.:.:...|       ::.|.....:.:|:    |..| ..|::::::  
Yeast   181 ITSTRSFLYGKASVRMKTARSRGV-------VTAFDLTSAIGDEI----DFEWLGGDLMTAQS-- 232

  Fly    82 WTYRNRNHQLRPGDVLYYWTTARYH-GVD----YHNY 113
             .|.::.|       |.|....|:. |.|    ||.|
Yeast   233 -NYYSQGH-------LDYTRMQRFPVGADTWATYHTY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP-like3NP_611483.1 CBM39 26..121 CDD:292510 19/94 (20%)
CRR1NP_013314.1 ChtBD1_GH16 29..75 CDD:211314
GH16_fungal_CRH1_transglycosylase 143..354 CDD:185692 21/102 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345592
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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