DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP-like3 and XTH33

DIOPT Version :9

Sequence 1:NP_611483.1 Gene:GNBP-like3 / 37313 FlyBaseID:FBgn0034511 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_172525.1 Gene:XTH33 / 837596 AraportID:AT1G10550 Length:310 Species:Arabidopsis thaliana


Alignment Length:89 Identity:21/89 - (23%)
Similarity:36/89 - (40%) Gaps:18/89 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVKVNSPKGFEVSIPDEPGISLFAFHGKVNEEMD-DLSDQTWAADVVSSRNGRWTYRNR---NHQ 90
            :.::..|.||...:.....:|....:.|.::|:| :|..:        ||...||.:..   |..
plant    87 SARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGR--------SRRDDWTIQTNVYANGS 143

  Fly    91 LRPG--DVLYYW--TTARYHGVDY 110
            .|.|  :..|:|  .|..:|  ||
plant   144 TRTGREEKFYFWFDPTQAFH--DY 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP-like3NP_611483.1 CBM39 26..121 CDD:292510 21/89 (24%)
XTH33NP_172525.1 PLN03161 38..309 CDD:178706 21/89 (24%)
GH16_XET 38..309 CDD:185685 21/89 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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