DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP-like3 and XTR6

DIOPT Version :9

Sequence 1:NP_611483.1 Gene:GNBP-like3 / 37313 FlyBaseID:FBgn0034511 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_194311.1 Gene:XTR6 / 828686 AraportID:AT4G25810 Length:286 Species:Arabidopsis thaliana


Alignment Length:136 Identity:28/136 - (20%)
Similarity:41/136 - (30%) Gaps:42/136 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SIPDEPGISLFAFHGKVNEEMDDLSDQ---------------TWAADVVSSRNGRWTYRNRNHQL 91
            ||...|...:|:..|....|..::..|               .|.|:       .|..|.     
plant   146 SILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAE-------EWATRG----- 198

  Fly    92 RPGDVLYYWTTARYHGVDYHNYNQRYVV---GQGDSQRIDVNGSNGG--RQPIVANG-------H 144
              |.|...|:.|.: ...|..:|:...|   ||.....:...||.|.  .|.:.:.|       .
plant   199 --GLVKTDWSKAPF-TASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQ 260

  Fly   145 NTFNIY 150
            |.:.||
plant   261 NNYMIY 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP-like3NP_611483.1 CBM39 26..121 CDD:292510 18/96 (19%)
XTR6NP_194311.1 GH16_XET 22..283 CDD:185685 28/136 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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