DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP-like3 and XTH32

DIOPT Version :9

Sequence 1:NP_611483.1 Gene:GNBP-like3 / 37313 FlyBaseID:FBgn0034511 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_181224.1 Gene:XTH32 / 818259 AraportID:AT2G36870 Length:299 Species:Arabidopsis thaliana


Alignment Length:162 Identity:36/162 - (22%)
Similarity:60/162 - (37%) Gaps:53/162 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSKLTIY-LFLVAISVGSSLSYDVPKA-----TVKV---NSPKGFEVSIPDEPGISLFAFHGKVN 59
            ||.:::. :|.:.:..|||::...|.:     :.||   |..|||.         :|:   |..:
plant     3 NSLISLLSIFHLLVLWGSSVNAYWPPSPGYWPSSKVGSLNFYKGFR---------NLW---GPQH 55

  Fly    60 EEMDDLS-----DQTWAADVVSSRNGRWTYRNRNHQLRPG------------------------D 95
            :.||..:     |:|..:...|.:..|..|...|.:|:||                        |
plant    56 QRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVD 120

  Fly    96 VLYYWTTARYHGVDYHNYNQRYVVGQGDSQRI 127
            :.:..||   .|..|......|:.|.||.:.|
plant   121 IEFLGTT---FGKPYTLQTNVYIRGSGDGKII 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP-like3NP_611483.1 CBM39 26..121 CDD:292510 26/131 (20%)
XTH32NP_181224.1 LamG 39..297 CDD:419873 27/126 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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