DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GNBP-like3 and EXGT-A3

DIOPT Version :9

Sequence 1:NP_611483.1 Gene:GNBP-like3 / 37313 FlyBaseID:FBgn0034511 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_178294.1 Gene:EXGT-A3 / 814716 AraportID:AT2G01850 Length:333 Species:Arabidopsis thaliana


Alignment Length:95 Identity:17/95 - (17%)
Similarity:39/95 - (41%) Gaps:25/95 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ATVKVNSPKGFEVSIPDEPGISLFAFHG----KVNEEMD-----DLSDQTWAADVVSSRNGRWTY 84
            |::|:  |..:...:.    ::.:..:|    |.::|:|     ::.::.|........||. |:
plant    78 ASIKL--PSDYTAGVV----VAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGS-TH 135

  Fly    85 RNRNHQLRPGDVLYYWTTARYHGVDYHNYN 114
            ..|..:..    |::..|.     |:|.|:
plant   136 SGREERYN----LWFDPTE-----DFHQYS 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP-like3NP_611483.1 CBM39 26..121 CDD:292510 17/95 (18%)
EXGT-A3NP_178294.1 GH16_XET 29..290 CDD:185685 17/95 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.