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Protein Alignment GNBP-like3 and C08F1.12
DIOPT Version :9
Sequence 1: | NP_611483.1 |
Gene: | GNBP-like3 / 37313 |
FlyBaseID: | FBgn0034511 |
Length: | 152 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001309537.1 |
Gene: | C08F1.12 / 27219612 |
WormBaseID: | WBGene00269389 |
Length: | 104 |
Species: | Caenorhabditis elegans |
Alignment Length: | 96 |
Identity: | 19/96 - (19%) |
Similarity: | 33/96 - (34%) |
Gaps: | 38/96 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 YLFLVAISVGSSLSYDVPKATVKVNSPKGFEVSIPDEPGISL-----------------FAFHGK 57
|:.|..:...| :|...|.: .|..:||..|.|:: ..|.||
Worm 14 YIGLCYVDTSS-----LPNFCVMI----AFHYAIPVCPWINILVIPIVYRAFWAFNSHELGFSGK 69
Fly 58 VNEEMDDLSDQTWAA----DVVSSRNGRWTY 84
:.:|.:.|:. :|.:| :|.|
Worm 70 -----EPISGRQWSGVCRWNVETS---QWDY 92
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GNBP-like3 | NP_611483.1 |
CBM39 |
26..121 |
CDD:292510 |
16/80 (20%) |
C08F1.12 | NP_001309537.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1209387at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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