DRSC/TRiP Functional Genomics Resources

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Protein Alignment kdelr2a and KdelR

DIOPT Version :9

Sequence 1:NP_956397.1 Gene:kdelr2a / 373129 ZFINID:ZDB-GENE-030826-32 Length:212 Species:Danio rerio
Sequence 2:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster


Alignment Length:212 Identity:151/212 - (71%)
Similarity:186/212 - (87%) Gaps:0/212 - (0%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQILFALVFTTRYLDLLTSFISLYNTCMKV 65
            |||||..|||||:.|||||||||||:|||||||||||||||:|:.||||||.|:::||||:.|||
  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65

Zfish    66 IYIGCAYATVYLIYAKFRATYDGNHDTFRAEFLVVPVGGLAFLVNHDFSPLEILWTFSIYLESVA 130
            :::..:.|||||:|.||:||||.|||:||.|||:||...|:.::||:|:.:|:||||||||||||
  Fly    66 LFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVA 130

Zfish   131 ILPQLFMISKTGEAETITTHYLFCLGVYRALYLFNWIWRFYFEGFFDMIAIVAGVVQTILYCDFF 195
            ||||||::|:|||||:||:||||.||.||||||.||::|:..|..:|:|||.||||||:||||||
  Fly   131 ILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFF 195

Zfish   196 YLYVTKVLKGKKLSLPA 212
            |||:|||||||||.|||
  Fly   196 YLYITKVLKGKKLQLPA 212

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kdelr2aNP_956397.1 ER_lumen_recept 28..169 CDD:279187 96/140 (69%)