DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13426 and sec-61.G

DIOPT Version :10

Sequence 1:NP_611482.1 Gene:CG13426 / 37312 FlyBaseID:FBgn0034510 Length:105 Species:Drosophila melanogaster
Sequence 2:NP_001379136.1 Gene:sec-61.G / 179510 WormBaseID:WBGene00001303 Length:68 Species:Caenorhabditis elegans


Alignment Length:60 Identity:35/60 - (58%)
Similarity:47/60 - (78%) Gaps:0/60 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LMVPSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMHIPIVNIIM 104
            |:.|::.|.|:|.|..||||||||:|:|:|::...:||.|||.|||.|||:||||.|||:
 Worm     7 LIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIV 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13426NP_611482.1 secE <50..104 CDD:469787 32/53 (60%)
sec-61.GNP_001379136.1 secE <11..68 CDD:469787 33/56 (59%)

Return to query results.
Submit another query.