DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pak1 and Pak

DIOPT Version :9

Sequence 1:XP_021323273.1 Gene:pak1 / 373103 ZFINID:ZDB-GENE-030826-29 Length:587 Species:Danio rerio
Sequence 2:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster


Alignment Length:850 Identity:383/850 - (45%)
Similarity:457/850 - (53%) Gaps:285/850 - (33%)


- Green bases have known domain annotations that are detailed below.


Zfish     8 EDKPPAPPMRNTSTMIGSS------GKDSGPLNHGS--------KPLPPNPEDKRRKEGFIRSIL 58
            ||||||||:|.||...|:.      |...|.|..|.        :|||..|:|..||:..::|.:
  Fly     5 EDKPPAPPVRLTSNRGGNERSGGGVGVGGGGLGGGGMGDVPPDMRPLPKEPDDSDRKKKTLKSKI 69

Zfish    59 TGGGDKTNKKKERPEISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKLEQKKNPQAV 123
            .  |.|.:....:|.||.|::||||:||||||||||||||||.|||||..|||:|.|||||||||
  Fly    70 K--GSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQEQKKNPQAV 132

Zfish   124 LDVLKFYDSKETSN-NQKYMS---FTDKGVENFNSSSAVVPKTVSETP----------------- 167
            |||||::|:..... :.|||:   .|..|    :|.|.|...:.|.||                 
  Fly   133 LDVLKWFDNTTKQRPSSKYMTNAITTHSG----SSLSRVSSSSPSSTPTDSELHGSNSGGNLIGV 193

Zfish   168 --------------AVA---------------------------------------------TVS 173
                          |||                                             |||
  Fly   194 QLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSHSYNFVGHTVS 258

Zfish   174 EDEDE-----EED--------EATPPPVIAPRPEHTKSIYTRSV--IEP--LPPPLSTKDAATSP 221
            ....:     |:|        :..|||.:|.|||.|||||||.:  ::|  :|.|::......:|
  Fly   259 SSTSQHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVAPATTPATP 323

Zfish   222 ITNAAADGGSSSNAPS------------------SNTNTTNTNTTNTTNTTNTTST--------- 259
            :.|....||.|:.|.|                  :.|:.|.|.||..|..|:.|||         
  Fly   324 LQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSC 388

Zfish   260 ------------------------------------------SAASSTNAPS------------- 269
                                                      ||:|.::.||             
  Fly   389 STTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALPT 453

Zfish   270 -------------------------------------------TPQTT----------------- 274
                                                       ||:.|                 
  Fly   454 IHCPTPTSSSRNSTVSFPVAVPLPPIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGNQ 518

Zfish   275 ------------------DKSRKKKMSDEEILEKLNVLRSPSAGSIVSVGDPKKKYTRFEKIGQG 321
                              ..::|||||||||||||.        :|||||||.:|||:.||||||
  Fly   519 IAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLR--------TIVSVGDPNRKYTKMEKIGQG 575

Zfish   322 ASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 386
            |||||||||:.:||.|||||||||.|||||||||||||||||||:||:|||||||||.:||||||
  Fly   576 ASGTVYTAIESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVM 640

Zfish   387 EYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHCNQVIHRDIKSDNILLGMDGSVKLTDFG 451
            |||.|||||||||||||||.||||||||.||||||||.||||||||||||||||:||||||||||
  Fly   641 EYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFG 705

Zfish   452 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 516
            |||||:||||||:|||||||||||||||||.||||||:||||||||||:||||||||||||:|||
  Fly   706 FCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALY 770

Zfish   517 LIATNGTPELQNPEKLSAVFRDFLNRCLEMDVEKRGSAKELLQHQFLKVAKPLSSLTPLIIAAKE 581
            ||||||.||::..:|||:.|:|||::|||::|::|.||.:||:|.|||:|:||:||||||:||||
  Fly   771 LIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKE 835

Zfish   582 AAKNN 586
            |.|.|
  Fly   836 ATKGN 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pak1XP_021323273.1 PBD 73..130 CDD:307091 46/56 (82%)
PKc_like 283..586 CDD:328722 243/302 (80%)
PakNP_001138013.2 PBD 83..137 CDD:279166 44/53 (83%)
STKc_PAK_I 558..818 CDD:270814 215/259 (83%)
S_TKc 566..817 CDD:214567 208/250 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584070
Domainoid 1 1.000 438 1.000 Domainoid score I540
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1936
Inparanoid 1 1.050 627 1.000 Inparanoid score I838
OMA 1 1.010 - - QHG52925
OrthoDB 1 1.010 - - D425477at33208
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 1 1.000 - - otm26309
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - LDO PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X799
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

Return to query results.
Submit another query.