DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VIII and nphs1

DIOPT Version :9

Sequence 1:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster
Sequence 2:NP_001035777.1 Gene:nphs1 / 692352 ZFINID:ZDB-GENE-051102-1 Length:1242 Species:Danio rerio


Alignment Length:750 Identity:173/750 - (23%)
Similarity:269/750 - (35%) Gaps:170/750 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RVSSSTTMTRNIEEENALLLLLAGPPVLSESIMGTVGRLPCNVT---PPIYEDRVALVIWYKVGL 93
            |...|.|.|..:..|.|.:.||..    .|::.|....|.|:.:   ||::      :.|: :|.
Zfish   316 RSPMSLTRTLTVPFEPAEVTLLGS----FEAVEGEEINLSCSTSSSNPPVH------IRWW-LGF 369

  Fly    94 KTPIYSVDTRDSNFAQGTHWSDETYRERLSFHVEGRAGTLTIKSTTEDDTGEYRCRVDFQKSPTR 158
            |    .::..:..||:|.:....|            ...||.|.:.||:....:|.. |.|. ||
Zfish   370 K----ELNRTEVTFAEGDNGGMMT------------VSNLTHKVSREDNGLSLQCEA-FNKG-TR 416

  Fly   159 NSKV---NLTVIIPPESVIILDSKGVTIEDHTLGPYNEGSGINITCVAIGGRPQPRVTWLHGNTV 220
            .|.|   .|.|..||:.| .||:....:..|:      ||.:.:.|.:.||.|..::|||..|.|
Zfish   417 FSSVRAAELIVYYPPQKV-WLDAPPPNVFLHS------GSTLRLVCFSSGGNPTGQLTWLKNNKV 474

  Fly   221 YKNASVGQPLSERRVGNTLSLARLERRNLHMQLTCRAENNNLTTPIISSVVLDMNLRPLI-VKLQ 284
            ...|| .|..|||.|...|.|......||   .|.|.:::|....::|:......|.|.: ||:.
Zfish   475 VLTAS-KQVSSERGVSRELLLTLHPSDNL---ATYRCDSSNKAKKVLSAQTKFRVLFPAVSVKIV 535

  Fly   285 GENRALSAGNSYQLSCVVIGARPAPTITWWKGSTPMKNTHEI---ATPDGNLTTSVLTFTPTIDD 346
            .:.:.|..|.:..|.|:...:.|...|:|..|...:|...:.   |...|...||.|:.|.....
Zfish   536 AKQKELRRGQTLDLDCLAGSSNPTANISWSLGPVILKGVDQAPKRAEFGGMSRTSKLSLTLEPHH 600

  Fly   347 RGKFLSCRAEQSMIPESGMEDGWKLDIYHIPVVSLELGTNSLNSTLREGIDVFFECNIKSNPWIY 411
            ..|.::|:|..:::.| |:.:.:.||:...|..|.|   ......:.|.........:.:||...
Zfish   601 WRKRITCQAFSNVLSE-GVNNFYSLDVLFPPEFSAE---QPDEVQVIEDETATLPAKVSANPDEI 661

  Fly   412 EVSWRHNGKILTNNPAEGIAVSNQSLVLQNASRARSGIYTCVGSNREGDGESNPVQLDIRFAPVC 476
            ...|...|:.|..........|:.:|.:.|.||...|.|....||.||...:. ::||::::|..
Zfish   662 TCEWIFQGEKLVKERDPRYTFSDWTLEIVNVSRRDGGDYIIECSNAEGSNRTK-LRLDVQYSPTV 725

  Fly   477 RPR-QRLSYSSGRHETVKVACEIDANP-AEATYVWKFNATQGE---------------------- 517
            |.: ..:..:.|  :|..:.|..|||| ..:.:.||:.. :||                      
Zfish   726 RMKSDPVFVNIG--DTADLLCVADANPITSSMFSWKWMG-EGERDELGEESEDDGTGVLTIYEVT 787

  Fly   518 ---------TVDIPASQVAVDRGRSIAHYTP---------------------------------- 539
                     |.|...|......|:.|..:.|                                  
Zfish   788 RDRAGVYQCTADNGISPTGSVEGQLIVRFAPDLQKGPQWRKVASRGDGSNDANVVCQAQGVPRVQ 852

  Fly   540 -------------------MTEN------------------DYGTLLCWATNEIGDQSEPCVYTI 567
                               .||:                  ||....|.|.|.:|:.|  ....:
Zfish   853 FRWAKNGFPLDLGNPRYEETTESTGTIHTSILTVINVSAALDYAIFTCTAHNSMGEDS--LDIQL 915

  Fly   568 FPAGEPDPLLNCTVLNQTSTGFQIECIEGFNGGLQQDFIMEVYMNGTTRHPKIS--KSKRPYFEV 630
            .....|||..:..:|....|...:|.:.||:|||.|.|.:.....|:..:..:.  ......:.|
Zfish   916 LSTNHPDPPSDLKLLRVDQTSVTLEWMPGFDGGLTQIFRVRYQWAGSASYMYVDVFPPTATVYTV 980

  Fly   631 SGLVPGMGYNVFLIANNSKGRS----NATILQVYT 661
            :||.|...||..:.|.||.|.|    |..||.|.|
Zfish   981 TGLNPSTMYNFSVNALNSIGESSYADNNKILTVTT 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 26/116 (22%)
IG_like 60..166 CDD:214653 26/111 (23%)
Ig 182..266 CDD:299845 26/83 (31%)
Ig 296..373 CDD:299845 19/79 (24%)
IG_like 389..464 CDD:214653 17/74 (23%)
IGc2 394..459 CDD:197706 15/64 (23%)
Ig_3 490..554 CDD:290638 22/166 (13%)
nphs1NP_001035777.1 IG_like 33..126 CDD:214653
Ig 133..216 CDD:386229
Ig 261..313 CDD:386229
Ig 333..419 CDD:386229 25/114 (22%)
ig 439..511 CDD:365836 25/81 (31%)
IG_like 637..719 CDD:214653 18/82 (22%)
Ig_3 723..800 CDD:372822 14/79 (18%)
Ig_hNephrin_like 814..922 CDD:143250 10/109 (9%)
FN3 921..1012 CDD:238020 27/90 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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