DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VIII and igcm-1

DIOPT Version :9

Sequence 1:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster
Sequence 2:NP_508166.1 Gene:igcm-1 / 180433 WormBaseID:WBGene00018215 Length:1073 Species:Caenorhabditis elegans


Alignment Length:1218 Identity:236/1218 - (19%)
Similarity:389/1218 - (31%) Gaps:435/1218 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PPVLSESIMGTVGRLPCNVTPPIYEDRVALVIW--YKVGLKTPIYSVDTRDSNFAQGTHWSDETY 118
            |..|.|...|.|  :||.|.|..::.:...:.|  |..|....|    |::.......|      
 Worm    35 PYFLQEGNEGIV--IPCVVKPEYFDRQKYEINWARYNNGQLRMI----TKNDKLLAKKH------ 87

  Fly   119 RERLSFHVEGRAGTLTIKSTTEDDT---GEYRCRV------DFQKSPTRNSKVNLTVIIPPESVI 174
             .|.....:...|..:::.|..:..   |.|.|.|      |.|.|    :...:.|::||...|
 Worm    88 -SRFILENDSATGNYSLRITEVEKNSVEGTYHCNVIGTDDSDVQYS----ALATVVVLVPPGDPI 147

  Fly   175 ILDSKGVTIEDHTLGPYNEGSGINITCVAIGGRPQPRVTW-LHGNTVYKNASVGQPLSERRVGNT 238
            |..:...::        .||..:...||::||.|||..|| |..:|:..:|..   .::.|.|.|
 Worm   148 ISTTPSESV--------IEGDFMTAKCVSVGGSPQPTFTWTLPNDTIASSAIF---TTQFRDGAT 201

  Fly   239 LSLARLERRNLHMQLTCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSCVVI 303
            .||       ||.::|...:.        .||..|:.           |||:..|.:.|:....:
 Worm   202 ESL-------LHFRVTSSDDG--------KSVQCDVT-----------NRAMLGGETKQVKSSQL 240

  Fly   304 GARPAPTITWWKGSTPMKNTHEIATPDG---NLTTSVLTFTPTID-----------DRGKFLSCR 354
            .....|.:.    .||.:|...::..:|   |||.:..:..|...           .:||....|
 Worm   241 NVLYKPVVF----VTPTENLTHLSVEEGELVNLTCNSASNPPAHSYEWKHIASGERYQGKIWPIR 301

  Fly   355 AEQSMIPESG---------MEDG---WKLDIYHIPVVSLELGTNSLNSTLREGIDVFFECNIKSN 407
            .:.||   ||         :.:|   .|:.:.|||.:::   ..|::....|.||:.  |.:.:.
 Worm   302 VDSSM---SGDFECRSTNELGEGTAVLKMVVQHIPRINV---PESISPNEMEDIDIL--CEVSAV 358

  Fly   408 PWIYEVSW------RHNGKILTNNPAEGIAVSNQSLVLQNASRARSGIYTCVGSN---------- 456
            |.:.::.|      :.||..||               :.:.|:|:||.|||:.:|          
 Worm   359 PEVIDIKWVGPNGFKQNGSRLT---------------ITSISKAQSGNYTCMATNFLTVYGHSGS 408

  Fly   457 --REGDGESNPVQLDIRFAP----VCRPRQRLSYSSGRHETVKVACEI-DANPAEATYVWKFNAT 514
              |.|.|.:   .:|::..|    :...||.:...    ||:|:.|:. ||....|:|.|...::
 Worm   409 QQRMGTGTT---IVDVKRKPGQAQIVSARQNVDVG----ETIKLMCQAEDAGNPSASYTWASPSS 466

  Fly   515 QG---------ETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLCWATNEIGDQSEPCVYTIFPA 570
            .|         ::.::..:|::.:...|...|..:.|...||::.....:....|......||.:
 Worm   467 GGIFGLEGHTEKSFEVRNAQLSDNGVYSCKAYNDLGEGKIGTVMITVIEKARISSPLATERIFTS 531

  Fly   571 GEPDPLLNCTVLNQTSTGFQIECIEGFNGGLQQDFIMEVYMNGTTRHPKISKSKRPYFEVSGLVP 635
            ||...:|.|     .:.|:....|:....|  :.....:|.:..|     |:||        .:|
 Worm   532 GEQGKILEC-----EAQGYPSPVIKWLKDG--RPVKQSIYASSAT-----SESK--------CLP 576

  Fly   636 GMGYNVFLIANNSKGRSNATILQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTTSDCVC 700
                         :.....|:....||..|.|.:.|..||                      ||.
 Worm   577 -------------EDFCTQTVASTLTLAGPLKWSDKGNFT----------------------CVA 606

  Fly   701 DEDEFLNLGKGISHDEGTDADQQEDLS-----LAYAPVIEDIR-PFLGILAGIVGSIFLVALIIV 759
                          |.|:|...::..|     :.:.||..:.: |...:.|..:||        .
 Worm   607 --------------DNGSDKTDKDSSSWTIVRVLHKPVFLNRKFPEKSLAAADIGS--------Q 649

  Fly   760 IVVRVRGSSG---------RD---RNNYSHPGSGVGGVGGVGGTTGNGSGMGGGGGGVGGTTANG 812
            .::|.:.|:.         ||   ..|..|....|                     |:.|.....
 Worm   650 AIIRCKVSARPEPEFHWMFRDSEISENERHSFHTV---------------------GITGKPDEY 693

  Fly   813 NGSLGL--LASNNNGSLVIGTLGHNGGQSVQDMHRIGRETCHVTSSLDSIDKNPDIIPQDGHDLD 875
            ...|.:  :..::.|..|......|||.             ||...|..  .:|..:|.|...|.
 Worm   694 EQLLQIESVQESDYGEYVCRATNGNGGD-------------HVVIELRK--TSPPALPLDLQKLS 743

  Fly   876 DEWTTKGHGRTYATAAMAEQNAVIT------SGTYDHLMPTYAVVDKKTAPPPGHGQYIQYNTLI 934
                             |..|:|:.      .|..|.   ||.:..:|..|..|.   |..|.  
 Worm   744 -----------------ATSNSVLLGWVPQFDGGADQ---TYVLETRKIDPFTGE---IDGNA-- 783

  Fly   935 PVSKMGAYANQQQQLQQQPQQKTELSYSELSAPLVSGPV----GVQRMAPYCSATLGRPGRQAEL 995
            ||||:...|.||.|              |:...|||..:    |:..::.|              
 Worm   784 PVSKLNINAVQQDQ--------------EIDGTLVSKNIFNFTGLTPLSTY-------------- 820

  Fly   996 KRAEPNIYSQVNVMMDDEILADLQAATASGRSYVAGAVVDNVGGAPNLYVQGYATRIDLAHHPMP 1060
                                                          ||.:|..:.:.:....|:.
 Worm   821 ----------------------------------------------NLRIQAVSEKGESEFTPVL 839

  Fly  1061 MYSTSPMFGTNSTITGVTMSHPSQLATFS--------PTPPPPIFTHSMVTTGDGLLQPVTCMGL 1117
            :.|      |...:....|..||:|...|        |..|....|...|.. ||:.:..||.  
 Worm   840 IAS------TEDVVEDANMMSPSRLVLDSSEQKINVEPKLPSDACTLLYVFL-DGIWRTSTCH-- 895

  Fly  1118 VATSSAGASVPGPVPLAPQQQQQQQLTAANG------------GNGSI 1153
            .:::..|..:||      ::.:.:..|.|||            |:||:
 Worm   896 TSSNPIGNIIPG------REYRARFCTTANGLKCSPVSKTISSGSGSV 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 25/120 (21%)
IG_like 60..166 CDD:214653 23/116 (20%)
Ig 182..266 CDD:299845 22/84 (26%)
Ig 296..373 CDD:299845 19/102 (19%)
IG_like 389..464 CDD:214653 21/92 (23%)
IGc2 394..459 CDD:197706 19/82 (23%)
Ig_3 490..554 CDD:290638 16/73 (22%)
igcm-1NP_508166.1 Ig 45..119 CDD:299845 16/86 (19%)
Ig 146..226 CDD:299845 28/116 (24%)
Ig_3 245..316 CDD:290638 16/77 (21%)
IG_like 258..329 CDD:214653 14/73 (19%)
IG_like 338..398 CDD:214653 18/76 (24%)
IGc2 347..398 CDD:197706 17/67 (25%)
Ig_2 429..513 CDD:290606 18/87 (21%)
IG_like 437..513 CDD:214653 16/79 (20%)
Ig 537..615 CDD:143165 24/146 (16%)
IG_like 644..728 CDD:214653 19/125 (15%)
IGc2 646..719 CDD:197706 14/101 (14%)
FN3 733..843 CDD:238020 34/214 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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