DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and LCL3

DIOPT Version :9

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_011430.1 Gene:LCL3 / 852795 SGDID:S000003053 Length:274 Species:Saccharomyces cerevisiae


Alignment Length:187 Identity:40/187 - (21%)
Similarity:63/187 - (33%) Gaps:55/187 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   769 KTTPILVSHINDDGDLMVLL-----------RNDDLK---FVERSIAQTVADLGEQDRVSYSDLL 819
            |:..:.|..|...|..:.|:           |.:|:.   |.:..:...|..:|:.|..      
Yeast    10 KSADVAVLSIILTGSTLTLIYTYKRYLTQFKRTNDIPRRIFRKHWLYGKVTSVGDGDNF------ 68

  Fly   820 HDRHIFVCDETVDGVKQWFRGRLVTRPLNPDEES------------FDVYYVDDGRQRKAHI--- 869
               |.|.....:.|...|.|.  |.:.:..|..:            |:..::..||..|:.|   
Yeast    69 ---HFFHMPGGIRGGWGWLRP--VPQMIKNDSTAEKLVGDSRNMRFFNFNWITHGRSTKSKIQKA 128

  Fly   870 -SNIYRLEA---NNRALATFPPQAIPVRL--HDVPEIGGHMLHRLRGLIPWRTEALL 920
             |...:|..   |.:.|.|     ||:||  .|.||    ..|......|:..|||:
Yeast   129 KSQFLKLNVPYKNRKNLPT-----IPIRLCGIDAPE----RAHFGNPAQPFGNEALI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:278965
TUDOR 766..896 CDD:278965 32/161 (20%)
TUDOR 1032..1151 CDD:278965
TUDOR 1087..1131 CDD:119391
LCL3NP_011430.1 SNase 149..261 CDD:395448 11/32 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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