DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and Tdrd1

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_006527536.1 Gene:Tdrd1 / 83561 MGIID:1933218 Length:1173 Species:Mus musculus


Alignment Length:1099 Identity:218/1099 - (19%)
Similarity:351/1099 - (31%) Gaps:366/1099 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 KAPVMNGHGP--RHVKVANGQDKHNDGKPPLRAILGNSASQ---RQQDTSTVYHSPESSFKRPRH 298
            ::||...:.|  |.....||..|:|       .:|.....|   .|:|:|.|..:|         
Mouse    34 RSPVAQHNHPTFRLKSPENGNTKNN-------FLLCEQNKQYLASQEDSSVVSSNP--------- 82

  Fly   299 PRVMYPGHQRTTGVSVNHRLKVTPQSDAPTPAVAPITP-----PASPEYAQTTTAAKATYKEDIH 358
                         ..||..:..:.....|.|...|::|     .:.|...:|..::..|.::...
Mouse    83 -------------AVVNGEVGGSKGDRKPPPTGNPVSPLSLGNSSPPNQVKTKPSSNVTPEKSKK 134

  Fly   359 GGQ-GETGNVVTNPKVKVPLKFDPSLDPV--STLNFYCAANDFEKPAYNIFNKLRNLHCSVQIAG 420
            ..: .|....|.||.:     |: ||.|.  ||....|          .:|..||...|      
Mouse   135 SHKLFENALSVNNPAL-----FN-SLGPPLRSTTCHRC----------GLFGSLRCSQC------ 177

  Fly   421 DVYSSYPQEFTDKETAYQRTAQIAIQRIMHAQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGH 485
                        |:|.|..|   |.|| ....||..:.......:                   :
Mouse   178 ------------KQTYYCST---ACQR-RDWSSHSTICRPVQQSL-------------------N 207

  Fly   486 KLEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMVLPW 550
            ||||       ...|.....:.|||.::....|:...|        ::..:|...:.|..:.|..
Mouse   208 KLED-------NKSPFETKAIEVKSEQVDCPPGVTKEI--------TAGAERVMFSDLRSLQLKK 257

  Fly   551 QSSEGGS-----HDWNMFISFCDSTKIVWARMIDQIANFEELTKHIGRQMESPHFRQKVSKPYAQ 610
            .....|:     |..|.:|....|         :.:.|..:|:..:                  :
Mouse   258 TMEIKGTVTEFKHPSNFYIQLYSS---------EVLENMNQLSTSL------------------K 295

  Fly   611 EVYLVEMP-DG------------------WNRVRAISVDEETRSGRYHFIDFGDVAMFHSE---- 652
            |.|...:| ||                  |||....:||...|.....:||:|:..|...:    
Mouse   296 ETYANVVPEDGYLPVKGEVCVAKYTVDQTWNRAIVQAVDVLQRKAHVLYIDYGNEEMIPIDSVHP 360

  Fly   653 -----DLFHCPPQFL-----------------------ALPAQAVCLSMYALDKFEDHPHALQVL 689
                 |||  ||..:                       ||..:..| |:..:|..|:     :||
Mouse   361 LSRGLDLF--PPSAIKCCVSGVIPTAGEWSEGCVAAVKALLFEQFC-SVKVMDILEE-----EVL 417

  Fly   690 T-----------KELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDTSTAEDI- 742
            |           |:||      |||      :|:|...:...::...::      .|.|..||: 
Mouse   418 TCAVDLVLQSSGKQLD------HVL------VEMGYGVKPGEQSSTEQS------VDHSALEDVG 464

  Fly   743 ----------HLNDLVAKRITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMV--LLRNDDLKF 795
                      ..|.|:.|.:|           ..:|.....:|:||....|...  |.....|..
Mouse   465 RVTVESKIVTDRNALIPKVLT-----------LNVGDEFCGVVAHIQTPEDFFCQQLQSGHKLAE 518

  Fly   796 VERSIAQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPDEESFDVYYVD 860
            ::.|:::....:  ..|..:...:.|    ||........||:|..::.   ...|||..|.|||
Mouse   519 LQESLSEYCGHV--IPRSDFYPTIGD----VCCAQFSEDDQWYRASVLA---YASEESVLVGYVD 574

  Fly   861 DGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDV-PEIGGHMLHRLRGLIPWRTEAL----- 919
            .|   ...|.::.||......|...|.||:...|..| |.:|           .|..||:     
Mouse   575 YG---NFEILSLKRLCPIIPKLLDLPMQALNCVLAGVKPSLG-----------IWTPEAVCVMKE 625

  Fly   920 --------LKVVAMDGGKPLVNVFIREDPESMYMCVNIGLRLELEMASSIHPEKYDHTLLSSNVQ 976
                    ::||.|.|.:.||.:                  ::..:|..:...|   .|:.|...
Mouse   626 MVQNRMVTVRVVGMLGTRALVEL------------------IDKSVAPHVSASK---ALIDSGFA 669

  Fly   977 LPRRGSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIP------AVGAY 1035
            :..:.......|..::|..|....|.                        ||:.      .|...
Mouse   670 IKEKDVADKGSSMHTASVPLAIEGPA------------------------EALEWTWVEFTVDET 710

  Fly  1036 FEVRVALSVNPGHFAVQPYKYY------NQLQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAPD 1094
            .:|.|.:..:||.|    |.::      .:|..|.::|.::|.:....|.:..   ||....|..
Mouse   711 VDVVVCMMYSPGEF----YCHFLKDDALEKLDDLNQSLADYCAQKPPNGFKAE---IGRPCCAFF 768

  Fly  1095 S-EGVYHRVSIHKIYDE-IIHVRFVDVGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDV 1157
            | :|.::|..:.:|... .:.|.|||.|:...:..|||:.:.|:...||...:...|..||..:.
Mouse   769 SGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVDIQPPNK 833

  Fly  1158 VWSKENCVRFRELSLGQKFIGIVRRMTKQKDGGRALCLELVDTSTPKDIKLHEILINEK 1216
            .|:||...||:...:|.|....|..:|....|     :||.|.|||....:.::||.|:
Mouse   834 HWTKEATARFQACVVGLKLQARVVEITANGVG-----VELTDLSTPYPKIISDVLIREQ 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 27/160 (17%)
TUDOR 769..896 CDD:425754 30/128 (23%)
TUDOR 1034..1151 CDD:425754 30/124 (24%)
Tdrd1XP_006527536.1 zf-MYND 163..199 CDD:460312 14/67 (21%)
Tudor_TDRD1_rpt1 263..392 CDD:410479 27/157 (17%)
Tudor_TDRD1_rpt2 513..594 CDD:410480 20/92 (22%)
TUDOR 716..825 CDD:425754 27/115 (23%)
Tudor_SF 937..1052 CDD:470623
Blue background indicates that the domain is not in the aligned region.

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