DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and TDRD1

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_942090.1 Gene:TDRD1 / 56165 HGNCID:11712 Length:1189 Species:Homo sapiens


Alignment Length:1065 Identity:219/1065 - (20%)
Similarity:366/1065 - (34%) Gaps:276/1065 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 KPPLRAILGNSASQRQQDTSTVYHSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLKVTPQSDAPT 328
            |.|...:..|:........:..::..::..|.|.|..:..||   |.....|.|||.:...:...
Human     4 KSPFNVMSRNNLEAPPCKMTEPFNFEKNENKLPPHESLRSPG---TLPNHPNFRLKSSENGNKKN 65

  Fly   329 PAVAPITPPASPEYAQTTTAAKATYKE------------DIHGGQGE-----TGNVVTNPKVKVP 376
            ..:          ..:.|....|:.::            ::.|.:|:     .||.|:.|..:  
Human    66 NFL----------LCEQTKQYLASQEDNSVSSNPNGINGEVVGSKGDRKKLPAGNSVSPPSAE-- 118

  Fly   377 LKFDPSLDPVSTLNFYCAANDFEKPAYNI-------FNKLRNLHCSVQIAGDVYSSYPQEFTD-- 432
                 |..|...:|.        ||..|:       .|||        :...:..|.|..||.  
Human   119 -----SNSPPKEVNI--------KPGNNVRPAKSKKLNKL--------VENSLSISNPGLFTSLG 162

  Fly   433 ---KETAYQRTAQIAIQRIMHA-QSHQKLSACTFSDVEFIDGLYKELLKHPHGIL-------GHK 486
               :.|...|.......|.... |::...:||...|..            .|.|:       .||
Human   163 PPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWS------------AHSIVCRPVQPNFHK 215

  Fly   487 LEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMVLPWQ 551
            ||:......:.         :..:||.....|:...|.::|        :|...:.|..:.|...
Human   216 LENKSSIETKD---------VEVNNKSDCPLGVTKEIAIWA--------ERIMFSDLRSLQLKKT 263

  Fly   552 SSEGGS-----HDWNMFISFCDSTKIVWARMIDQIANFEELTKHIGRQMESPHFRQKVSKPYAQE 611
            ....|:     |..:.::....|..:.:...:.  |:.:|...::         .:|...|...|
Human   264 MEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS--ASLKETYANV---------HEKDYIPVKGE 317

  Fly   612 V----YLVEMPDGWNRVRAISVDEETRSGRYHFIDFGDVAMFHSEDLFHC-------PP----QF 661
            |    |.|:..  |||....:||.:.:.....:||:|:..:.....::|.       ||    .|
Human   318 VCIAKYTVDQT--WNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCF 380

  Fly   662 LA--LPAQ----AVCL------------SMYALDKFEDHPHALQVLTKELDGQTVVAHVLTTEKQ 708
            :|  :||:    :.|:            |:..:|..|:......|..:..:...::.|||     
Human   381 VANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVL----- 440

  Fly   709 FLELGGSAQGVVENGKRRACLVATLYDTSTAED-----------IHLNDLVAKRITKCTPAPSLS 762
             :|:|...:...::.|:...      |.|..||           :..:||:.|.:|         
Human   441 -IEMGYGLKPSGQDSKKENA------DQSDPEDVGKMTTENNIVVDKSDLIPKVLT--------- 489

  Fly   763 DEKKIGKTTPILVSHINDDGDLMVLLRNDDLKFVE-----RSIAQTVADLGEQDRVSYSDLLHDR 822
              ..:|.....:|:||....|.          |.:     |.:|:..|.|.:     |.|.|..|
Human   490 --LNVGDEFCGVVAHIQTPEDF----------FCQQLQSGRKLAELQASLSK-----YCDQLPPR 537

  Fly   823 HIF------VCDETVDGVKQWFRGRLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANNRA 881
            ..|      :|........||:|..::.   ...|||..|.|||.|   ...|.::.||......
Human   538 SDFYPAIGDICCAQFSEDDQWYRASVLA---YASEESVLVGYVDYG---NFEILSLMRLCPIIPK 596

  Fly   882 LATFPPQAIPVRLHDV-PEIGGHMLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFIREDPESMYM 945
            |...|.|||...|..| |.:|           .|..||:..:..:...| ::.|.:.:..|:..:
Human   597 LLELPMQAIKCVLAGVKPSLG-----------IWTPEAICLMKKLVQNK-IITVKVVDKLENSSL 649

  Fly   946 CVNIGLRLELEMASSIHPEKYDHTLLSSNVQLPRRGSFSSVFSNQSSSSDLVATTPPVTPEKKPS 1010
                   :||...|..........||.:...:   |..|.|   ....||:..|:.|:..|.|.:
Human   650 -------VELIDKSETPHVSVSKVLLDAGFAV---GEQSMV---TDKPSDVKETSVPLGVEGKVN 701

  Fly  1011 ARSTGSTFSSLMLKDYEAIPAVGAYFEVRVALSVNPGHFAVQPYK--YYNQLQTLMKNLQEHCQK 1073
            ....  |:..|         .|....:|.|.:..:||.|.....|  ...:|..|.|:|.||||:
Human   702 PLEW--TWVEL---------GVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQ 755

  Fly  1074 TAAKGVQPSQLAIGE---AYAAPDSEGVYHRVSIHKIY-DEIIHVRFVDVGDDGVIACDQLKTLN 1134
            ....|.:..   ||:   |:.|.|  |.::|..:.:|. :..:.|.|||.|:...:..|:|:.::
Human   756 KLPNGFKAE---IGQPCCAFFAGD--GSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMIS 815

  Fly  1135 PELRKLPKMALPAQLYGIQLTDVVWSKENCVRFRELSLGQKFIGIVRRMTKQKDGGRALCLELVD 1199
            .....||...:..||..||..:..||:|...||:....|.|....|..:|:...|     :||.|
Human   816 STFLNLPFQGIRCQLADIQSRNKHWSEEAITRFQMCVAGIKLQARVVEVTENGIG-----VELTD 875

  Fly  1200 TSTPKDIKLHEILINE----KHAQP 1220
            .||.....:.::||:|    |.|.|
Human   876 LSTCYPRIISDVLIDEHLVLKSASP 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 25/142 (18%)
TUDOR 769..896 CDD:425754 35/137 (26%)
TUDOR 1034..1151 CDD:425754 34/122 (28%)
TDRD1NP_942090.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66 13/64 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..138 12/73 (16%)
zf-MYND 170..206 CDD:460312 8/47 (17%)
Tudor_TDRD1_rpt1 268..396 CDD:410479 26/140 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..469 5/24 (21%)
Tudor_TDRD1_rpt2 517..598 CDD:410480 24/91 (26%)
TUDOR 715..832 CDD:425754 34/121 (28%)
Tudor_TDRD1_rpt4 944..1059 CDD:410482
Blue background indicates that the domain is not in the aligned region.

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