DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tapas and tud

DIOPT Version :9

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster


Alignment Length:1174 Identity:225/1174 - (19%)
Similarity:382/1174 - (32%) Gaps:427/1174 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 VFNKNPEYITRRKKE-LKKEDDLDRGQITKEVAREKQKEK-ETRDRAVTETIFVTIENKKAPVMN 244
            :...|...|...|.| |....|||        ...||.|| ::|.....||:.:|::.::     
  Fly  1465 ILENNQSVIDLLKAEKLVPGKDLD--------YMRKQMEKGKSRTYEYIETVDLTLDEEE----- 1516

  Fly   245 GHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVYHSPESSFKRPRHPRVMYPGHQRT 309
            ..|.:.....:|.              .|::.:::|...           :.|.|:...|.....
  Fly  1517 DKGRKETVSKSGS--------------ANASPKKKQHND-----------KDREPKKSKPAEPAR 1556

  Fly   310 TGVSVNHRLKVTPQ-----SDAPTPA-VAPITPPAS--------PEYAQTTTAAKATYKEDIHGG 360
            |         |.||     :.:|.|| .||:..||:        ||...|...|.|..|:     
  Fly  1557 T---------VAPQPVALKTPSPVPAEPAPVPKPATPVPEVVEVPEINPTVREAAAESKQ----- 1607

  Fly   361 QGETGNVVTNPKVKVPLKFDPSLDPVSTLNFYCAANDFEKPA------YNIFNKLRNLHCSVQIA 419
                          .|.:.||..|....:..:|     :.||      .:..:||..||.::|| 
  Fly  1608 --------------APAQEDPYKDLDCVVLSHC-----DNPAQFYVHPIDQLSKLNQLHENLQI- 1652

  Fly   420 GDVYSSYPQEFTDKETAYQRTAQIAIQRIMHAQ---SHQKLSACTFS----DVE-----FIDGLY 472
              |..|.||                :..:::..   |...:..|.:.    |.|     |||   
  Fly  1653 --VSPSLPQ----------------LMNVVNGADCVSMYSVDKCWYRAKIIDAELMVLLFID--- 1696

  Fly   473 KELLKHPHGILGHKLEDWYGST--------FRQHLPSH-------------------WYDLIVKS 510
                              ||:|        .::.:.||                   |.|   .:
  Fly  1697 ------------------YGNTDCVSDATDIKESMWSHIEPFCLPCALPIRPKGTADWVD---AA 1740

  Fly   511 NKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMVLPWQSSEGGSHDWNMFISFCDSTKIV-- 573
            |.|..|                      |.:.:|::....|.....:...||:|...|..|.:  
  Fly  1741 NGIFNE----------------------SYSKVPRLEYLTQGDHYTTSYVNMYIDGEDVAKKLIA 1783

  Fly   574 --WARMIDQIAN---------------FEELTKHIGRQME--SPHFRQK-VSKPYAQEVY----- 613
              :||.::.:|:               |.:|.:. .:.:|  ..:.|:| ..||.  |.:     
  Fly  1784 DGFARPLEYLASGCSCYISHVNGICDFFIQLERD-SKALELIELYLRKKDTLKPL--EGFEKGLI 1845

  Fly   614 ---LVEMPDGWNRVRAISVDEETRSGRYH--FIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSM 673
               |.|..:.|.|.:   :.:|....||.  |||:|:.:                  ..:.||.:
  Fly  1846 VAALFEDDELWYRAQ---LQKELPDSRYEVLFIDYGNTS------------------TTSKCLML 1889

  Fly   674 YALDKFEDHPHALQVLTKELDGQTVVAHVL---TTEKQFLELGGSAQGVVENGKRRACLVATLYD 735
                  .:...:|..|:|:...|...|::.   ..|.:|.||.|..:           ||.|...
  Fly  1890 ------SEEIASLPSLSKKCSLQLPDAYISWSPEAEAKFAELTGEGE-----------LVFTTQL 1937

  Fly   736 TSTAEDIHL--------NDLVAKRITKC-TPAPSLSDEKKIGKTTPILVSHINDDGDLMVLLRND 791
            ....:| |:        .:::.:.:..| ...|..:.::.:..||..:::|:.:...:.      
  Fly  1938 LKPGQD-HVTIDLLLDGENIIDRLLPLCQRKEPKEASKESLAVTTKAIITHVENTSRIY------ 1995

  Fly   792 DLKFVERSIAQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPDEE--SF 854
             |:|.|:                  |.|.|   .:| |.::|.|           |.|..|  :.
  Fly  1996 -LQFSEK------------------DSLMD---IIC-EKLNGSK-----------LQPKTEKAAV 2026

  Fly   855 D----VYYVDDGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDVPEIGGHMLHRLRGLIPWR 915
            |    |.:.||        ...||                 .|:.:|.|                
  Fly  2027 DDMCVVQFADD--------LEFYR-----------------SRILEVLE---------------- 2050

  Fly   916 TEALLKVVAMDGGKPLVNVFIREDPESMYMCVNIGLRLELEMASSIHPEKYDHTLLSSNVQLPR- 979
             :...||:.:|.|...|...:.|.|:...:...:.....:| .|:|..:....||.:.:..|.. 
  Fly  2051 -DDQYKVILIDYGNTTVVDKLYELPQEFTLIKPVAEICSME-PSAIFEKNKALTLTTFDALLDSC 2113

  Fly   980 RGSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIPAV-----------G 1033
            :|..:..|.|:|:|..:|..|   |.:|:             .||.||.:..:           .
  Fly  2114 KGVVAVEFVNKSASPPVVRLT---TKDKR-------------SLKIYEHLQKLVQAELKLIQKRN 2162

  Fly  1034 AYFEVRVALSVNPGHFAVQPYKYYNQLQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAPDSEGV 1098
            ...|..::...:|..|.||.......|..::|.||...::...|.:.|:..:.|..|:..|:  .
  Fly  2163 ENSECIISYGNSPKSFYVQMKHNSADLDLIVKTLQSLKKEKLKKLIDPTTNSNGVCYSQEDA--C 2225

  Fly  1099 YHRVSIHKIYD--EIIHVRFVDVGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDVVWSK 1161
            |:|.||..:.|  :...|..:|.|:..|:  .::..|..|:..:|.:||..||..|.: ||  |.
  Fly  2226 YYRCSIKSVLDPSQGFEVFLLDYGNTLVV--PEVWQLPQEIEPIPSLALHCQLSKIPM-DV--SD 2285

  Fly  1162 ENCVRFRELSLGQKFIGIVRRMTKQ--KDGGRALCL-----------ELVDTST----PKDIKLH 1209
            |.........|.|.| |.:..:|.|  :|..:.|..           |||.|.|    |.:.:||
  Fly  2286 EKLEEAFAALLEQHF-GELYEITTQPNEDETKPLIAELRINYKDFVQELVSTVTGVQKPLEAELH 2349

  Fly  1210 EILI 1213
            ..::
  Fly  2350 NCVV 2353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:278965 27/141 (19%)
TUDOR 766..896 CDD:278965 23/135 (17%)
TUDOR 1032..1151 CDD:278965 30/131 (23%)
TUDOR 1087..1131 CDD:119391 12/45 (27%)
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965 27/157 (17%)
TUDOR 1666..1711 CDD:119391 10/65 (15%)
TUDOR 1791..1906 CDD:278965 25/144 (17%)
TUDOR 1843..1886 CDD:119391 11/63 (17%)
TUDOR 1975..2089 CDD:278965 32/195 (16%)
TUDOR 2028..2069 CDD:119391 13/82 (16%)
TUDOR 2159..2277 CDD:278965 29/121 (24%)
TUDOR 2210..2264 CDD:197660 14/57 (25%)
TUDOR 2345..2458 CDD:278965 2/9 (22%)
TUDOR 2396..2437 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4998
43.910

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