DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and rnf17

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_021334643.1 Gene:rnf17 / 334519 ZFINID:ZDB-GENE-030131-6451 Length:1521 Species:Danio rerio


Alignment Length:1331 Identity:247/1331 - (18%)
Similarity:448/1331 - (33%) Gaps:361/1331 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 QKHTHGNKYHYQQRNKQPNHQPDQEIGRAAKCENQAIAEHKQDLTGIITQELFESFNNIQGPFSE 178
            :|...|:|:..|:....|:         :|....:..||.|.|:..::.:.|.::        :|
Zfish    88 KKGHSGDKWKSQKFKSPPS---------SAAVHTEENAEGKPDVVKVLDEALTKA--------TE 135

  Fly   179 NLQVFNKNPEYITRR-KKELKKEDDLDRGQITKEV--AREKQKEKETRDRAVTETIFVTIENKKA 240
            ||...:|..:.:... ..:|:||    |.:|.:|:  |.||.|....:.|::..:...:::    
Zfish   136 NLNQLDKLHQTLANGVHGQLRKE----RSRIIREIDEAVEKAKSILLKRRSMLVSTLSSVD---- 192

  Fly   241 PVMNGHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVY----------HSPESSFKR 295
             ::...|....|....:.|.      ||..:..:...||..:...|          |.|......
Zfish   193 -LLFSGGQMECKRIEERIKE------LRTAIQKARHVRQVPSLETYCDLEKILETLHIPVDLESY 250

  Fly   296 PRHPRVMYPG---HQRTTGV--SVNHRLKVTPQSDAPTPAVAPITP------------------- 336
            ......:..|   |.:..|.  ||...||:|...|........:.|                   
Zfish   251 DMSSLTLRSGLSCHLQVDGFTESVKVFLKITDTDDNCIVEEITVEPFQHVVKSGVEMWDNSSQSV 315

  Fly   337 ----PASPEYAQTTTAAKATYKED---------IHGGQGETGNV--------------------- 367
                .|.|..:..|........||         ::.|.|....|                     
Zfish   316 QGKADAIPRKSNNTRRFMEKMMEDTCPEIADTRVNAGLGRNLPVHEPRRMERYNKGYRKQRRPQF 380

  Fly   368 --VTNPKVKVPLKFDPSLDPVSTLNFYCAANDFEKPAYNIFNKLRNLHCSVQIAGDVYSSYPQEF 430
              .|||:.|: :::..:...|:..:||.......|....:..|:... ||.:.:   :.::..|.
Zfish   381 EKPTNPQPKL-VQYVVTTHIVNPGHFYVRYMAEHKLGQKLTKKISEF-CSGERS---FFTFSDEI 440

  Fly   431 TDKETAY-----QRTAQIAIQRIMHAQSHQKLSACTFSDVE-----FID-GLYK----------- 473
            |.....:     ....::.:..:...:..|.::.|..|:|.     |:| |.:|           
Zfish   441 TTGSLLFISWKDDMWCRVKVTELFQKECFQSVTKCLASEVSRLCVYFLDYGFFKGFSIPSDGGLS 505

  Fly   474 ---ELLKHPHGILGHKLEDW----YGSTFRQHLPSHWYDLI-----VKSNKIR-VEHGIDPRIIL 525
               |.|:.|.||...::.:|    ...:.:..:|:   ||:     ..|.::| |.......:.:
Zfish   506 GLNECLRRPDGITLIEMANWAPLAIKCSLKDIIPA---DLVKGWSSEASEEMRNVLRNETAEMQV 567

  Fly   526 FANDPGSSEPD--RTSITTLPQMVLPWQSSEGGSHDWNMFIS----FC-----DSTKIVWARMID 579
            |..|..:...|  :||:..|.      ::|.....:..:|:.    :|     .|..:::...:.
Zfish   568 FGEDGDALLVDLKKTSMADLK------KNSMVSLREHLVFMELARFYCPVITTGSAPLLFYPSVQ 626

  Fly   580 QIANFE--ELTKHIG----------RQMESPHFRQKVSKPYAQ-------EVYLVEMPDG----- 620
            ...|.|  .:..|:.          ...|.|....|:...|.|       :||...:...     
Zfish   627 PSLNVEVNAMVSHVNTPSDFYVQLVENTEYPLLHSKLQDCYNQPKSNNECQVYCPSLSQACVAFH 691

  Fly   621 ---WNRVRAISVDEETRSGR---YHFIDFGDVAMFHSEDLFHCPPQFLALPAQAV-CLSMYALDK 678
               |:||:.....    .||   ..|:|||.......:||.|...:|..||..|: |.....:..
Zfish   692 DQEWSRVQVTGFP----GGRMVEVRFVDFGYKRTLSVKDLRHIKDEFFVLPEMALWCNLNDVISS 752

  Fly   679 FEDHPHALQVLTKEL-DGQ--TVVAHVLTTEKQ-----FLELGGSAQG------VVENGKRRACL 729
            .|...:......||| :|:  ||||.......:     ..|:.....|      :|:.|      
Zfish   753 QETWANEACESFKELVEGKLMTVVAKKNVPSSKPVPVCLFEISDDCTGASIGDELVKKG------ 811

  Fly   730 VATLYDTSTAEDIHLNDLVAKRITKCTP------------APSLSDEKKIGKTTP-------ILV 775
             ..:|:    :|..:.|......|...|            ..|.|:|.|...:.|       :.|
Zfish   812 -YAVYN----KDTQVRDAQPLETTSWDPPFEEEALPVVMTPSSASEELKPSLSLPSCLKDIRVRV 871

  Fly   776 SHINDDGDLMVLLRNDDLKFVERSIAQTVADL---GEQDRVSYSDLLHDRHIFVCDETVDGVKQW 837
            :|:...|::.|.|...|.:.  :.|..|:.:|   .|...:.:...::      |.....||  |
Zfish   872 THVTSPGNICVQLLQFDNQL--KRIHDTLKNLFSKSEPQEMQWEAEMY------CAVNNTGV--W 926

  Fly   838 FRGRLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDVPEIGG 902
            .||::.:.......|   |...|.|...|.|:.|:..|..:  .:.:|   .:...|..|...||
Zfish   927 ERGQVCSVSTCGVAE---VLRCDFGNTVKLHVDNLRPLHPD--LIGSF---LLECNLSGVRPAGG 983

  Fly   903 H----------MLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFIREDPESMYMCVNIGLRLELEM 957
            .          :.|.|.|.:     ||:.:........||::|          |.|       ..
Zfish   984 RSTWTATACDFISHYLTGAM-----ALMAIKEPSTRPVLVSLF----------CSN-------RA 1026

  Fly   958 ASSIHPEKYDHTLLSSNVQLPRRGSFSSVFSNQSSSSDLVATTP---------PVTPEKK---PS 1010
            ..::   .:...|:|..:.|..|.: ..|||.:|    ::.|.|         |.||.::   |.
Zfish  1027 GQNV---SFADFLISEGLALKERKA-EMVFSEES----VLVTEPQPVISPTQTPPTPSRRINPPP 1083

  Fly  1011 ARSTGSTFSSLMLKDYEAIPAVGAYFEVRVALSVN----PGHFAVQPYKYYNQLQTLMKNLQEHC 1071
            .|....::..      ..:|..|     .:.:|::    .|......::...:...|.:.||:|.
Zfish  1084 ERVKTHSYPP------PELPPCG-----HILMSISAVSEQGVIYAMTHQAVCEFDRLRERLQQHI 1137

  Fly  1072 QKTAA-------KGVQPSQLAIGEAYAAPDSEGVYHRVSIHKIYDEIIHVRFVDVG-DDGVIACD 1128
             ||..       |||      :|.|....|.  .::|..:.::....:.||:||.| .:.:..|.
Zfish  1138 -KTLPRQKNYNWKGV------LGCAVMGTDM--FWYRGQVQEVIGGHVKVRYVDQGLVESIPVCH 1193

  Fly  1129 QLKTLNPELRKLPKMALPAQLYGIQLTDVVWSKENCVRFRELSLGQKFIGIVRRMTKQKDGGRAL 1193
            ....:..|  .:|::.:|.|:.|:......|..:..|..:||.||:..  .|:.|...||....:
Zfish  1194 VYPMVLCE--DVPQLCVPCQINGVLPIGKGWQWDAVVLMKELLLGRSV--NVQIMEHPKDPCGCV 1254

  Fly  1194 CLE-LVDTSTPKDIKLHEILINEKHA--QPA 1221
            .:| :||     .:.|.:|:::.::|  .||
Zfish  1255 TVEIMVD-----GMALSKIMVHHQYATFDPA 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 30/149 (20%)
TUDOR 769..896 CDD:425754 27/136 (20%)
TUDOR 1034..1151 CDD:425754 25/128 (20%)
rnf17XP_021334643.1 RING_Ubox 6..66 CDD:473075
TUDOR 394..534 CDD:425754 23/143 (16%)
Tudor_SF 659..749 CDD:470623 22/93 (24%)
Tudor_SF 894..965 CDD:470623 18/83 (22%)
Tudor_TDRD4_rpt4 1148..1215 CDD:410488 17/76 (22%)
Tudor_TDRD4_rpt5 1376..1481 CDD:410489
Blue background indicates that the domain is not in the aligned region.

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