DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tapas and snd1

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_878285.3 Gene:snd1 / 324404 ZFINID:ZDB-GENE-030131-3124 Length:913 Species:Danio rerio


Alignment Length:665 Identity:128/665 - (19%)
Similarity:229/665 - (34%) Gaps:172/665 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 LQVLTKELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDLVAK 750
            :|::.:....|.::..:|.......||      :::.|..|....:....|..||.:...:..||
Zfish   262 VQIILESCPNQVILGTILHPNGNITEL------LLKEGFARCVDWSMAVYTQGAEKLRAAERSAK 320

  Fly   751 ----RITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMVLLRNDDLKFVERSIAQTVADLGEQ- 810
                ||.|...||:.:.::|..:....::..:|.|. ::|.|.:.:.|.:..|..:.....||: 
Zfish   321 ERKVRIWKDYVAPTANLDQKDRQFVAKVMQVVNADA-IVVKLNSGEYKTIHLSSIRPPRLEGEEK 384

  Fly   811 --DRVSYSDLLHD-RHIFVCDE-------------TVDGVKQWFRGRLVTRPLNPDEESFDV--- 856
              |:......|:| .::|...|             |||.::.......:..|..|:.....|   
Zfish   385 NKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAFPERTCATVTIG 449

  Fly   857 -----------------YYVDDGRQRKAHISNIYRLEA----NNRALATFPPQAIPVRLHDVPEI 900
                             .|..|..||.:|...:...||    |.:.|.:  .:.:|:  |.|.:|
Zfish   450 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHS--KKEVPI--HRVADI 510

  Fly   901 GGHMLHRLRGLIPW-----RTEALLKVV-------------------------------AMDGGK 929
            .|. ..:.:...|:     |:||:::.|                               .|.||.
Zfish   511 SGE-TQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRGSRNMPGGM 574

  Fly   930 PLVNVFIRE----------------DPESMYMC-----------VNIGLRLELEMASSIH----P 963
            .:...:..|                :.|||...           ||:.:.|.....|.:|    .
Zfish   575 QVAEPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWLHIEGVNLSVALVENALSKVHFTAER 639

  Fly   964 EKYDHTLLSSNVQLPRRGSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEA 1028
            ..|..||:|:.....:|.  ..:::|.               |:||.......|         ||
Zfish   640 SSYYKTLVSAEESARQRK--EKLWANY---------------EEKPKEEVAQVT---------EA 678

  Fly  1029 IPAVGAYFEVRVALSVNPGHFAVQPYKYYNQLQTLMKNLQEH--CQKTAAKGVQPSQLAIGEAYA 1091
            ...|..|..|.|....:..||..|..:...:|:.||::::..  .|........|.:   ||...
Zfish   679 KERVAKYRSVYVTEITDGLHFYAQDVETGTKLENLMESMRGEIAAQPPVEGSFAPRR---GEFCI 740

  Fly  1092 APDSEGVYHRVSIHKIYDEI-IHVRFVDVGDDGVIACDQLKTLNP--ELRKLPKMALPAQLYGIQ 1153
            |..::|.::|..:.|:.... :||.::|.|:..|::..:|..|.|  ..|.||..|.......||
Zfish   741 AKFADGEWYRARVEKVESPAKVHVFYIDYGNREVLSSTRLAALPPAFSTRTLPPQATEYAFAYIQ 805

  Fly  1154 L-------TDVVWSKENCVRFRELSLGQKFIG-IVRRMTKQ-----KDGGRALCLE-LVDTSTPK 1204
            :       .|.|.|....:...:..|..::.| :..::|.|     :|.|..|..| :|.....|
Zfish   806 VPQDEDARADAVDSVVRDIHNTQCLLNVEYSGSVCPQVTLQFADTKEDVGLGLVKEGMVMVDIRK 870

  Fly  1205 DIKLHEILINEKHAQ 1219
            :..|.:::....:||
Zfish   871 EKYLQKMVTEYLNAQ 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754
TUDOR 769..896 CDD:425754 29/167 (17%)
TUDOR 1034..1151 CDD:425754 29/121 (24%)
snd1NP_878285.3 SNc 18..167 CDD:214615
SNc 194..329 CDD:214615 14/72 (19%)
SNc 351..499 CDD:238102 28/150 (19%)
SNc 536..663 CDD:238102 18/128 (14%)
Tudor_TDRD11 706..788 CDD:410504 19/84 (23%)
SNc <847..898 CDD:469627 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.