DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and Rnf17

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001028215.1 Gene:Rnf17 / 30054 MGIID:1353419 Length:1640 Species:Mus musculus


Alignment Length:1165 Identity:230/1165 - (19%)
Similarity:389/1165 - (33%) Gaps:351/1165 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 EVAREKQKEKETRDRAVTETIFVTIENKK--APVMNGHGPRHVKVANGQDKHNDGK--------- 264
            |..:..||:...|.....: ::.::|.||  |.|:....|.....|...|:|.:||         
Mouse   314 EDGQNVQKKFNNRKELCCD-VYSSLEKKKVDAAVLTDETPEPPLQAEAPDRHLEGKKKQPTKEMV 377

  Fly   265 ----PPLRAI---LGNSASQRQQDTSTVYHSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLKVTP 322
                |...|:   ||:|.....::  .:..:.||.|.........||              |..|
Mouse   378 VVTSPKTIAVLPQLGSSPDVIIEE--IIEENLESCFTDDPIETSGYP--------------KKPP 426

  Fly   323 QSDAPTPA-----------VAPITPPAS---PEYAQTTTAAKATYKEDIHGGQGETGNVVTNPKV 373
            |.:...|.           |:.:..|..   .:|:|...|                  .:...|:
Mouse   427 QKEQSAPVGSKAGCPELVFVSHVIHPCHFYVRKYSQIKDA------------------TILEKKM 473

  Fly   374 KVPLKFDPSLDPVSTLNFYCAANDFEKPAYN-----------IFNKLRNLH--CSVQIAGDVYSS 425
            |........|||...|..  .|..|.....|           |.:|.:|:.  ||          
Mouse   474 KQVCNRSLHLDPSDILEL--GARIFVNSIKNRMWCRGIITEIIPSKTKNIRKPCS---------- 526

  Fly   426 YPQEFTDKETAYQRTAQIAIQRIM-------------------HAQSHQKLSACTFSDVEFI--- 468
             |.:|:        ..:|::.:|.                   ....|......|.||...:   
Mouse   527 -PTKFS--------VCEISLIQIFMVDFGNSEVLIITGVGDTHEGPEHDGEQHITLSDFCLLLMK 582

  Fly   469 -DGLYKELLKH-PHGILGH--KLEDW--YGST--FRQHLPSHWYDLIVK---------------- 509
             :...:||||. ||  |.|  .|:|.  |.||  :.:.....:..::.|                
Mouse   583 SEPYSEELLKDIPH--LAHLCSLKDIVPYNSTEGWEKEAKVEFLKMVNKKAVLMKVFGEEDDVLI 645

  Fly   510 -------SNKIRVEHGIDPRIILF--------ANDPGSSEPDRTSITTLPQMVLPWQSSEGGSHD 559
                   :|||..:..:..|..|.        :..|.|.....|::...|. :||.:.:|     
Mouse   646 VDLQKPPTNKISSDMPVSLRDALVFMELARFRSQSPRSHSEKNTTLCYHPP-ILPEEMTE----- 704

  Fly   560 WNMFISFCDSTKIVWARMIDQIANFEELTKHI--------GRQMESPHFRQKVSKPYAQEVYLVE 616
            .::.:...:|....:.::::.: :|..|.|.|        |..:|       :..|...:..:.:
Mouse   705 VSVMVCHINSPTDFYLQLMENL-DFLSLLKTIEEFYKGEDGENLE-------ILCPLQNQACVAK 761

  Fly   617 MPDG-WNRVRAISVDEETRSGRYHFIDFGDVAMFHSEDLFHCPPQFLALPAQAV-CLSMY----- 674
            ..|| |.|.:.|.:... |.....::|||:.|....:|:.....:||..|.:|: |...|     
Mouse   762 FEDGIWYRAKVIGLPGH-REVEVKYVDFGNTAKITLKDMRKIKDEFLEPPEKAIKCKLAYVEPSK 825

  Fly   675 -------ALDKFEDHPHALQVLTKELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVAT 732
                   |.:|||:                      .|:.:|:..  |...::||.    .|:..
Mouse   826 KSQWSKKAKEKFEE----------------------KTQDKFVTC--SVIKILENN----VLLVE 862

  Fly   733 LYDTST--AEDIHLND-LVAKRITKCTPAPSLSDEKK----IGKTTP--ILVSHINDDGDLMV-- 786
            |:|:..  ...:.:|| ||.:.:.......:|.|..|    :...:|  |:.|.||:...|.|  
Mouse   863 LFDSRAPGKSAVSINDQLVKEGLASYEAGYTLKDNSKKHLEVWDPSPEEIITSEINNLSPLSVKS 927

  Fly   787 -------LLRNDDLK------------FVERSIAQTVADLGEQDRVSYSDLLH----------DR 822
                   .|.|.:|.            :|:..:.:.:.:..|:..|:..:  |          |.
Mouse   928 LPNENFQSLYNKELPVNICNVISPEKIYVQWLLTENLLNSLEEKMVAAYE--HSEWKPVKWECDM 990

  Fly   823 HIFVCDETVDGVKQWFRG---RLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANNRALAT 884
            |   |...|....||.||   |:||      ::..:|...|.|.:...:|..:..|:.|   |.|
Mouse   991 H---CAVKVPAKNQWRRGQILRMVT------DKLVEVLLYDVGVELVVNIHCLRELQEN---LKT 1043

  Fly   885 FPPQAIPVRLHDVPEIGGH-----------MLHRLRGLIPWRTEALLKVVAMDGGK--PL-VNVF 935
            ....::...|.|:...||.           .||        .|.|:..::..:...  || |.:|
Mouse  1044 MGRLSLECSLVDIRPTGGSDKWTATACDCLSLH--------LTGAIATIILQESNTTWPLPVKIF 1100

  Fly   936 IRED-----PESMYMCVNIGLRL---ELEMASSIH-PEKYDHTLLSSNVQLPRRGS-----FSSV 986
            .|::     ..|.|: :..||.|   .:..:|:.| |||      |..:.|.:..|     |...
Mouse  1101 CRDEKGERVDVSKYL-IKKGLALRERRVSKSSNSHSPEK------SLEIPLEQGDSVVTKCFKIN 1158

  Fly   987 FSNQSSSSDLV-ATTPPVTPEKKPSARSTGSTFSSLMLKDYE--AIPAVGAYFEVRVALSVNPGH 1048
            |......:|.| ....|.:..||..:||||.         |.  |:|...: ||..|....:.|.
Mouse  1159 FDTNKKIADKVNEHKVPDSKGKKSESRSTGC---------YRPPAVPNTSS-FEAIVTCIGDDGT 1213

  Fly  1049 FAVQPYKYYNQLQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAPDSEGVYHRVSIHKIYDEIIH 1113
            ..|.|.....:|..:|..:|.:.:....  ::|.....||..|...|:.:::|..:.::....|.
Mouse  1214 IFVVPKLSEFELIKMMDEIQSNLKCLGL--LEPYSWKKGEPCAVRGSDTLWYRGKVMEVVGGTIR 1276

  Fly  1114 VRFVDVG-DDGVIACDQLKTLNPEL--RKLPKMALPAQLYGIQLTDVVWSKENCVRFREL 1170
            |:::|.| .:.:..|.    |.|.|  ...|:..:|.|||........|..:.....:||
Mouse  1277 VQYLDHGFTEKIPQCH----LYPILLYPDTPQFCIPCQLYQTLPVGNTWQPDAIELLQEL 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 24/119 (20%)
TUDOR 769..896 CDD:425754 34/162 (21%)
TUDOR 1034..1151 CDD:425754 27/119 (23%)
Rnf17NP_001028215.1 PRK03918 87..>273 CDD:235175
CC_brat-like 158..>242 CDD:475168
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..376 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..435 6/35 (17%)
Tudor_TDRD4_rpt1 490..565 CDD:410485 12/95 (13%)
Tudor_TDRD4_rpt2 728..823 CDD:410486 24/102 (24%)
Tudor_TDRD4_rpt3 968..1049 CDD:410487 22/94 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1170..1191 7/29 (24%)
Tudor_TDRD4_rpt4 1247..1314 CDD:410488 18/70 (26%)
Tudor_TDRD4_rpt5 1494..1598 CDD:410489
Blue background indicates that the domain is not in the aligned region.

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