DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tapas and Tdrd5

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_006250099.1 Gene:Tdrd5 / 289129 RGDID:1307078 Length:1046 Species:Rattus norvegicus


Alignment Length:983 Identity:175/983 - (17%)
Similarity:324/983 - (32%) Gaps:339/983 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKQEVLEYVAKVVRALITSAKPPVTLRSIVADYMEIEGEPIPFRRLGYSNDQELLKD-SNQFNFH 65
            |::.:.:.:.|.:|:|:.|.|..:|.:.:..:|:.:.|..:|.|.|||.:..||:.| .:..:..
  Rat     3 EQERIQDCLRKEIRSLLISTKDGLTPQQLEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVSVC 67

  Fly    66 QSGN-QVFITAKYNANTEHIVRMVRQQKTSKSTSLSKPTPIAQKPKPIAQKHTHGNKYHYQQRNK 129
            ..|: .|.:.|..:.:|:.|..:|.:|:.|                             ::.|| 
  Rat    68 PCGDGTVILKAIPDESTKGIASLVAKQRRS-----------------------------HKVRN- 102

  Fly   130 QPNHQPDQEIGRAAKCENQAIAEHKQD--LTGIITQEL-------------FE---------SFN 170
                  ..:.||::.|..:.....:..  |..::..||             ||         ||.
  Rat   103 ------SMQKGRSSVCSGRVPYRGRVPPILPAVVKSELKDLLALSPVLLSDFEKAFARRFGRSFQ 161

  Fly   171 NIQGPFSENLQVFNKNPEYI------------TRRKKELKKEDDLDRGQITKEVAREKQKEKETR 223
            .:|..|....:|.:...:.|            .::....:|:.:...|:|..:..|.||:...:.
  Rat   162 YMQYGFLSMFEVLSAASDVICVEQTRAGSLLTLKKSASEEKQREWPAGKIFTQPFRMKQQGSYST 226

  Fly   224 DRAVTETIFVTIENKKAPVMNGHGPRHV----KVANGQDKHNDGKPPLRAILGNSASQRQQDTST 284
            ...||:|.|      ..|:.|...|:.|    |:           |....:..:..|..::    
  Rat   227 GFPVTKTRF------SQPISNMEPPKQVLSMEKI-----------PMFNTVEASRLSHTEK---- 270

  Fly   285 VYHSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLK---------------------VTPQSDAP- 327
             .:..||:||..    :...|...|....:.|::|                     |..:..:| 
  Rat   271 -LNQLESTFKSV----IAQIGPGGTVDPDLKHKIKFVVSKFPQGLFISKLLGEFELVFKEQLSPK 330

  Fly   328 -------TPAVAPITPPASPEYAQTTTAAKATYKEDIHGGQGETGNVVTNPKVKVPLKFDPSLDP 385
                   |..|..::.....|:::.        |:|:                   |.||..|.|
  Rat   331 QLGFLNVTELVGALSDILRVEFSEE--------KQDL-------------------LVFDADLRP 368

  Fly   386 VSTLNFYCAANDFEKPAYNIFNKLRNLHCSVQ----IAGDVYSSYPQEFTDKETAYQRTA-QIAI 445
            :             .|| ...:.:|| .|.||    |..:.::|.|...:....|.::|. ...:
  Rat   369 L-------------LPA-GPLSSVRN-SCLVQPDKRIEANAWASSPSRNSLSTVAVKKTTWDCPL 418

  Fly   446 QRIMHAQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGHKLEDWYGSTFRQHLPSHWYDLIVKS 510
            :.  |.::.||              .||:                         |    :|:||.
  Rat   419 KN--HKEAEQK--------------AYKK-------------------------P----NLVVKP 438

  Fly   511 NKIRVEHGIDPRIILFANDPGSSEPDRT---SITTLPQMVLPWQSSE--GGSHDWNMFISFCDST 570
            .:::||.......:..||.  ...||..   .:..||    |..:|.  |      :|:.:..|.
  Rat   439 LQLQVETNKSQLSLSMANH--DIPPDAVRAKKLCRLP----PLDTSTLVG------VFVEYIISP 491

  Fly   571 KIVWARMIDQIANFEELTKHIGRQMESPHFRQKVSKPYAQEVYLVE----------MPDGWNRV- 624
            ...:.|:..:  :..||.:.:..:|...:..|.||..|....|.::          ....|.|| 
  Rat   492 SQFYVRIYSR--DSSELLEDMMIEMRRCYSNQLVSDRYVMPEYFIQPGHLCCVRISEDKWWYRVI 554

  Fly   625 --RAISVDEETRSGRYHFIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHALQ 687
              |.:...|.    ...:.|||::.......|......:..|||||:..|:..:...|:|..:..
  Rat   555 IHRILGKKEV----EVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPAEEHWTSKA 615

  Fly   688 VLTKELDGQTVVAHVLTTEKQFLELGG--SAQGVVE---NGKRRACLVATLYDTSTAEDIHLNDL 747
            :|                  .|.:|.|  ...|||:   :|    .|...|.|||:.||::.:.:
  Rat   616 IL------------------HFQKLCGLKPLVGVVDEYIDG----ILNIFLCDTSSNEDVYFHHV 658

  Fly   748 VAKR-----------------------ITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMVLLR 789
            :...                       .|..:.||......::|.  |....::|:||::     
  Rat   659 LRTEGHAIVCRENAPSKGFRDFNPPALYTNSSAAPGDMVLTELGH--PAQQHYLNEDGEI----- 716

  Fly   790 NDDLKFVERSIAQTVADLGEQDRVSY-----SDLLHDRHI--FVCDETVDGVKQWFRGRLVTRPL 847
                      :.|...|:.::..:|:     .:||.|..:  ....|:.:...||    .:.:|.
  Rat   717 ----------LQQPQQDINDEKSISHLKSVSEELLKDSKLGPLKTRESCEEEPQW----SILKPK 767

  Fly   848 NPDEESFD 855
            :|.||:.|
  Rat   768 DPKEENED 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586 22/86 (26%)
TUDOR 563..673 CDD:425754 25/122 (20%)
TUDOR 769..896 CDD:425754 18/94 (19%)
TUDOR 1034..1151 CDD:425754
Tdrd5XP_006250099.1 LOTUS_1_TDRD5 4..98 CDD:193599 24/122 (20%)
LOTUS_2_TDRD5 127..196 CDD:193589 10/68 (15%)
LOTUS_3_TDRD5 292..365 CDD:193590 12/99 (12%)
Tudor_TDRD5 484..601 CDD:410490 25/122 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.