DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tapas and tsn-1

DIOPT Version :9

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_494839.1 Gene:tsn-1 / 173811 WormBaseID:WBGene00006626 Length:914 Species:Caenorhabditis elegans


Alignment Length:679 Identity:135/679 - (19%)
Similarity:211/679 - (31%) Gaps:214/679 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 SITTLPQMVLPWQSSEGGSHDWNMFIS-----------------------FCDSTKIVWARMIDQ 580
            |:.:...::|..|...|...:|.:::|                       ..||.:.:..:::.|
 Worm    30 SVLSGDAVILQGQPHNGPPPEWTVYLSNVTAPRLGRRPTDSASATPDEPYAWDSREYLRQKLVGQ 94

  Fly   581 IANF-EELTKHIGRQMESPHFRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSGRYHFIDFG 644
            ...| .:.|...||.    |.|          :||    .|.:...|.:|.|...|.....:..|
 Worm    95 FVTFVRDFTATSGRD----HGR----------IYL----GGTSPADAENVAEGAVSAGLLEVRQG 141

  Fly   645 DVAMFHSEDLFHCPPQ---------------------FLALPAQAVCLSMYALDKFEDHPHALQV 688
            .||..:|..|.....|                     .:..|.:.|       ||:...| ...|
 Worm   142 KVADEYSTKLLELQEQAKSAGRGKWNSNAGTIRDIRWVIDNPRELV-------DKYAQKP-IDAV 198

  Fly   689 LTKELDGQTVVAHVLTT-EKQFLELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDLVAKRI 752
            :....||.||.|.:|.. |...|:|.|.......|              ..|.|           
 Worm   199 IEMVRDGSTVRAFLLPNFEYITLQLSGVRAPSTRN--------------PNAAD----------- 238

  Fly   753 TKCTPAPSLSDEKKIGKTTPIL----------VSHINDDGDLM--------VLLRNDDLKFVERS 799
               :.|.:.|:|.|....:.:|          .|:.|..|.::        .|||....|.|:.|
 Worm   239 ---SRAEAFSEEAKFFAESRLLQRDVQIILESTSNQNFVGSIVHPKGNIAESLLREGYAKCVDWS 300

  Fly   800 I------AQTVADLGEQDR-------VSYSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPDE 851
            |      ||.:.|...|.:       .||..         ......|.::.|.|::|...|:   
 Worm   301 IGLCTGGAQKLRDAERQAKEKRLRLWKSYQP---------TSSAYSGDRKAFTGKVVEIVLS--- 353

  Fly   852 ESFDVYYV--DDGRQRKAHISNIYRLEANNRALATFPP--QAIPVRLHDVPEIGGHMLHRLRGLI 912
               |...|  |||.:.|.|:|:|.....:....||..|  |..|  |:|:|     .:.:.|..:
 Worm   354 ---DAVVVQKDDGSEVKLHLSSIRLPRESGDDKATGGPGRQFRP--LYDIP-----FMFQAREFL 408

  Fly   913 PWRTEALLKVVAMDGGKPLVNVFIREDPESMYMCVNIG------------------LRLELEMAS 959
            ..|.......:.:|..:|....|    ||.....:.||                  .|.:.|..|
 Worm   409 RKRLLGKKVQIQIDYVQPKSENF----PEKTCATIKIGDQNIAEGLISRGLSKVVRHRADDENRS 469

  Fly   960 SIHPEKYDHTLLS--SNVQLPRRGSFSSVFSN-------QSSSSDLVATTPPVTPEKKPSAR--- 1012
            |    :|| |||:  :|.:..::|.|:...:.       |..:.|| |......|..:...|   
 Worm   470 S----EYD-TLLAAEANAEKGKKGLFADKTAEKKDTHRIQEITGDL-AKAKQFLPYLQRGGRAEG 528

  Fly  1013 -----STGSTFSSLMLKDYEAIPAVGAYFEVRVALSVNPGHF---AVQPY----KYYNQLQTLMK 1065
                 |.||.....:.|:...|..:...........|.||..   |.:|:    ..:.:...|..
 Worm   529 VVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGARVGPGGVSTGAAEPFADEAAAFTRKLVLQH 593

  Fly  1066 NLQEHCQKTAAKGVQPSQLAIGEAYAAPD 1094
            .:|...:.|...|     ..:|..|.:||
 Worm   594 EVQLEVESTDKNG-----NFVGYLYVSPD 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:278965 25/154 (16%)
TUDOR 766..896 CDD:278965 38/164 (23%)
TUDOR 1032..1151 CDD:278965 13/70 (19%)
TUDOR 1087..1131 CDD:119391 4/8 (50%)
tsn-1NP_494839.1 SNc 22..168 CDD:214615 28/155 (18%)
SNc 30..168 CDD:238102 28/155 (18%)
SNc 193..328 CDD:214615 34/163 (21%)
SNc 201..328 CDD:238102 32/154 (21%)
SNc 341..492 CDD:214615 42/172 (24%)
SNc 350..492 CDD:238102 39/163 (24%)
SNc 524..668 CDD:214615 19/99 (19%)
SNc 536..668 CDD:238102 17/87 (20%)
TUDOR 687..808 CDD:278965
TUDOR 744..788 CDD:119391
SNc 758..904 CDD:214615
SNc <850..906 CDD:294094
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.