DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and tdrd6

DIOPT Version :9

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_031758870.1 Gene:tdrd6 / 105948404 XenbaseID:XB-GENE-5969988 Length:2499 Species:Xenopus tropicalis


Alignment Length:1325 Identity:231/1325 - (17%)
Similarity:415/1325 - (31%) Gaps:487/1325 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVLEYVAKVVRALITSAKPPVTLRSIVADYME--IEGEPIPFRRLGYSNDQELLKD----SNQFN 63
            |:|.:..:.::..::..  |.|:...|..:.|  |..:|:....:....|.:|:.:    |.|.|
 Frog  1060 ELLHFPMQAIKCSLSDI--PDTIPREVVLWFENLILDKPLKALIVAKETDGKLIVELYDGSQQIN 1122

  Fly    64 FHQSGNQVFITAKY---NANTEHIVRMVRQQKTSKSTSLSKPTPIAQKPKPIAQKHTHGNKYHYQ 125
            ..       |.||.   |..||..  ....:|..:...|.|    ..:|....:.:..|:|:...
 Frog  1123 SS-------IKAKLGLKNPRTEGY--FGNAEKRHQLNDLDK----GGRPDSAFKLYNQGSKFSSD 1174

  Fly   126 QRNKQPN---HQPDQEIGRAAKCENQAIAEHKQDLTG----IITQELFESFNNIQGPFSENLQVF 183
            ..|...|   ||.....  .||..:|  .|.|.:|..    |..:|::....||    |::....
 Frog  1175 LDNHSQNGFTHQKSASF--VAKERDQ--FEQKPNLRTSRPYIQDREVYSVRKNI----SQSGYAP 1231

  Fly   184 NKNPEYITRRKKELKKEDDL-------------------DRGQITKEVAREKQKEKETRDRAVTE 229
            :|..|:.::.::.|::..:|                   :.|...|:....:.||:|..:.....
 Frog  1232 HKTGEFRSKDREALEQRPNLKTSGMYSQGREVSMSQNGSNSGFPPKKTGGFRSKEREVSEHKQNP 1296

  Fly   230 TIF--VTIENKKAPVMNGHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDT---------- 282
            ..|  ...|:|.:|.:..........::..|:.::.||.:      :|||:::.|          
 Frog  1297 DAFKGYNQESKMSPQLRNGSQMEASWSSESDRSSEHKPEI------NASQQRRSTFQECKSIPPL 1355

  Fly   283 STVYHSPESSFKRPRHPRVMYPGHQRT--------------TGVS--VNHRLKVTPQSDAPTPAV 331
            :.:...|:.:. .|.....:|..|..|              :.:|  :|:..|.:.:.|.....:
 Frog  1356 TKLSDLPKQNI-TPGFKSSVYISHTNTLSDFYVQIAQDTELSNISEILNNEKKPSDRLDEKDVNL 1419

  Fly   332 APITPPASPE---YAQTTTAAKATYKEDIHGGQGETGNVVTNPKVKVPLKFDPSLDPVSTLNFYC 393
            ..:......:   |.:.....|  :.:.:.....:.||.:|.|..:: .|..|||.....::.:|
 Frog  1420 GDLICAFFEDDGLYYRAVITEK--HSDGLQVQYIDYGNTLTIPASQI-YKLPPSLSSAPVMSIFC 1481

  Fly   394 AANDFEKPAYNIFNKLRNLHCSVQIAGDVYSSYPQEFTDKETAY-QRTAQIAIQRIMHAQSHQKL 457
            |           .:|.....|.            |...|....: :||..:.:            
 Frog  1482 A-----------LDKCTTAACE------------QNMDDLMVKFSERTGDLEL------------ 1511

  Fly   458 SACTFSDVEFIDGLYKELLKHPHGILGHKLEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPR 522
             :|.|  |:..:..:..:|....|.:.                    ||.:.::        ||.
 Frog  1512 -SCEF--VQCNNLKWNVILCDDQGCIN--------------------DLFISAS--------DPL 1545

  Fly   523 IILFANDPGSSEPDRTSITTLPQMVLPWQSSEGGSH-DWNM---------FISFCDSTKIVWARM 577
            :    |.|...|||.||           :...|.|| .||:         :.|..||.:..|.::
 Frog  1546 L----NPPSLEEPDVTS-----------EQLNGVSHYVWNLPALGERVEAYASAVDSPEHFWCQL 1595

  Fly   578 ----IDQIA----NFEELTKHIGR---QMESPHFRQKVSKP----YAQEVYLVEMPDGWNR--VR 625
                :|.:|    ...|.:.|.|:   ::|       |..|    |:::       :.|.|  |.
 Frog  1596 VTADVDSLAVKVQEAGERSVHDGKFSTEIE-------VGSPCNVIYSED-------NHWYRAAVT 1646

  Fly   626 AISVDEETRSGRYHFIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSMYALDK------------ 678
            .|..|:.|    ..|:|:|:..|.|.|.:...|.....:||||...|:...:.            
 Frog  1647 KIEADQVT----VRFVDYGNEEMLHLEQVRRLPADLATIPAQAFSCSLAGFNLSEGCWNSDANTF 1707

  Fly   679 -FEDHPHALQVLTKELDGQTVVAHVLTTEKQFLELG-----GSAQGVVENGKRRACLVATLYDTS 737
             :|:....|.|::        |.|:       .|||     .::..|..||:.....:...:..|
 Frog  1708 FYENVTEGLLVIS--------VLHI-------QELGPCKIPQASVNVSYNGENVNTKMRQFWQDS 1757

  Fly   738 T------AEDIHLNDLV------------------------AKRITKCTPAPSL----------- 761
            .      .|.:|..:::                        |..:|:....|::           
 Frog  1758 NEIPTPFLESLHAEEIIKDNTIPSQAVEDVADQSEQSEEPCASELTETPTVPTMYSNADGEEVTA 1822

  Fly   762 SDEKK-----IGKTTPILVSHINDDGDLM-------VLLRNDDLKFVERSI-----AQTVADLGE 809
            .||.|     :..|.....|..|.|.|||       .:.::.||..:|.::     ...|..|..
 Frog  1823 IDETKLEALPLSSTDEAAESTENTDVDLMRTECLLPEIQKSSDLSCLELTLDEDVPGSAVTPLAP 1887

  Fly   810 QD----------RVSYSDL--------------------LHDRHIFVCDETVDGVKQWFRGRLVT 844
            :|          :.||||:                    .||:.| ...|.:|.|          
 Frog  1888 EDLCIDYDESNIKESYSDITAMDQGELHHTEDIDLWTPAAHDQEI-ASSEIIDNV---------- 1941

  Fly   845 RPLN---------PDEESFDVYYVDDG--RQRKAHISNIYRLEANNRALATFPPQAIPVRL---- 894
             |::         |.|||.....:::|  .::.|...|...||          |:|..::.    
 Frog  1942 -PIDKECDYSVQEPTEESSASTGLEEGPAPEKNAFTENNDGLE----------PEAANLQSKGEE 1995

  Fly   895 HDVPEIGGHMLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFI-REDPESM--YMCVNI------G 950
            :.|||                 |:.:.|...:..:|.|:|.: |::.|.:  |..:.|      |
 Frog  1996 YLVPE-----------------ESTVAVCESEDFEPEVDVDLPRKENEDLPAYTYIPIPEDDGDG 2043

  Fly   951 LRLELEMAS----------SIHPEKYDHTLLSSNVQLPRRGSFSSVFSNQSSSSDLVATTPPVTP 1005
            |....|..|          ..:.|..|||:                                   
 Frog  2044 LGSPKEATSHEIGDAEGLGEQNQELLDHTI----------------------------------- 2073

  Fly  1006 EKKPSARSTGSTFSSLMLKDYEAIP------------------------AVGAYFEVRVALSVNP 1046
                 :..|...|..|..|:.|.||                        |.|:..:..|.|..:|
 Frog  2074 -----SECTNDDFDDLPSKEQEGIPLHSDADTDFAGTEDVPRDMKGDIEATGSQNKEDVTLGEDP 2133

  Fly  1047 GHFAVQPYK-YYNQLQTLMKNLQEH 1070
            .  ....|: |:.:.:.:.:..|||
 Frog  2134 A--TETEYRSYFLKAEDVDRPSQEH 2156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586 18/93 (19%)
TUDOR 563..673 CDD:278965 30/126 (24%)
TUDOR 766..896 CDD:278965 36/191 (19%)
TUDOR 1032..1151 CDD:278965 9/40 (23%)
TUDOR 1087..1131 CDD:119391
tdrd6XP_031758870.1 Tudor_SF 24..153 CDD:413384
Tudor_TDRD6_rpt2 258..389 CDD:410492
Tudor_SF 497..630 CDD:413384
Tudor_SF 734..863 CDD:413384
Tudor_SF 950..1073 CDD:413384 2/12 (17%)
Tudor_SF 1371..1483 CDD:413384 19/125 (15%)
Tudor_SF 1578..1717 CDD:413384 32/156 (21%)
MDN1 <1950..2492 CDD:227596 48/276 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4998
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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