DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and notch3

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_017948007.1 Gene:notch3 / 100494244 XenbaseID:XB-GENE-6450008 Length:2413 Species:Xenopus tropicalis


Alignment Length:438 Identity:86/438 - (19%)
Similarity:148/438 - (33%) Gaps:152/438 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 AILGNSASQRQQDTSTVYHSPESSFKRPRHPRVMYPGHQRTTG---VSVNHRLKVTPQSD----- 325
            |:||...|:|::..||::.......|:.|..|  .|..|...|   ::...||...|..|     
 Frog  1680 AVLGVIVSRRKRAHSTLWFPEGFILKKERDRR--EPVGQDALGLKNIAKAERLMEDPSEDWTETD 1742

  Fly   326 --------------------APTP------AVAPI-TPPASPEYAQTTTAAKATYKED-----IH 358
                                .|.|      |.|.| .|||:     ..|..:..|:.|     :.
 Frog  1743 CPETKKLKTEELSPCRQDPVDPRPWTQHHLAAADIRLPPAT-----ALTPPQGDYESDGMDVNVR 1802

  Fly   359 GGQGETGNVVTNPKVKVPLK----FDPSLDPVSTLNFYCAANDFEKPAYNIFNKLRNLHCSVQIA 419
            |..|.|           ||.    ....|:|.|.          |:......:.:.:|.|.....
 Frog  1803 GPDGFT-----------PLMLASFLGGGLEPESQ----------EEEEEGEASAITDLICQGASL 1846

  Fly   420 GDVYSSYPQEFTDK--ETAYQRTAQI----AIQRIM------HAQSH---QKLSACTFSDVEFID 469
            |        ..||:  |||....|:.    |.:|::      :||.|   ..|.|...:|.:   
 Frog  1847 G--------AQTDRTGETALHLAARYARADAAKRLLDAGADPNAQDHTGRTPLHAAVAADAQ--- 1900

  Fly   470 GLYKELLKHPHGILGHKLEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSE 534
            |:::.|:::....|..::.|  |||           .::.:.::.||..::..|...|       
 Frog  1901 GVFQILIRNRSTDLDARMGD--GST-----------ALILAARLAVEGMVEELITCHA------- 1945

  Fly   535 PDRTSITTLPQMVLPWQSS------------EGGSHDWN-------MFISFCDSTKIVWARMIDQ 580
             |..::..|.:..|.|.::            .|.:.|..       :|::..:.:......::|.
 Frog  1946 -DVNAVDELGKSALHWAAAVNNIEATLALLKNGANKDMQDSKEETPLFLAAREGSYEAAKVLLDH 2009

  Fly   581 IANFEELTKHIGRQMESPHFRQKVSKPYAQEVY---LVEMPDGWNRVR 625
            .|| .|:|.|:.|          :.:..|||..   :|::.:..|.||
 Frog  2010 YAN-REITDHMDR----------LPRDIAQERLHHDIVQLLEEHNTVR 2046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 15/66 (23%)
TUDOR 769..896 CDD:425754
TUDOR 1034..1151 CDD:425754
notch3XP_017948007.1 EGF_CA 105..139 CDD:238011
EGF_CA 142..179 CDD:238011
EGF_CA 220..256 CDD:238011
EGF_CA 258..295 CDD:238011
EGF_CA 298..333 CDD:238011
EGF_CA 375..413 CDD:238011
EGF_CA 415..451 CDD:238011
EGF_CA 453..489 CDD:238011
EGF_CA 491..526 CDD:238011
EGF_CA 529..564 CDD:238011
EGF_CA 567..602 CDD:238011
EGF 726..756 CDD:394967
EGF_CA 760..796 CDD:238011
EGF_CA 838..874 CDD:238011
EGF_CA 876..912 CDD:238011
EGF_CA 915..950 CDD:238011
EGF_CA 952..988 CDD:238011
EGF_CA 991..1026 CDD:238011
EGF_CA 1029..1063 CDD:238011
EGF_CA 1115..1150 CDD:238011
EGF_CA 1152..1188 CDD:238011
EGF_CA 1190..1232 CDD:238011
EGF_CA 1234..1272 CDD:238011
EGF_CA 1276..1313 CDD:238011
Notch 1410..1443 CDD:459658
Notch 1450..1484 CDD:459658
Notch 1498..1524 CDD:459658
NOD 1531..1584 CDD:462014
NODP 1601..1658 CDD:462229
JMTM_Notch3 1640..1726 CDD:411987 13/47 (28%)
ANK repeat 1805..1851 CDD:293786 11/74 (15%)
ANKYR 1833..2056 CDD:440430 49/257 (19%)
ANK repeat 1853..1884 CDD:293786 7/30 (23%)
ANK repeat 1887..1918 CDD:293786 6/33 (18%)
ANK repeat 1920..1951 CDD:293786 9/51 (18%)
ANK repeat 1953..1984 CDD:293786 5/30 (17%)
ANK repeat 1986..2017 CDD:293786 5/31 (16%)
Atrophin-1 2262..>2403 CDD:460830
Blue background indicates that the domain is not in the aligned region.

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