DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and tdrkh

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_031747152.1 Gene:tdrkh / 100145497 XenbaseID:XB-GENE-5945653 Length:720 Species:Xenopus tropicalis


Alignment Length:259 Identity:58/259 - (22%)
Similarity:106/259 - (40%) Gaps:43/259 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   946 CVNI-GLRLELEMASSIHPEKYDHTLLSSNVQ-LPRRGSFSSVFS---------NQSSSSDLVAT 999
            |:.: |.:.::| |:..|.:|     :|...| |.:|.:.||.|.         .:..:.:..:.
 Frog   188 CITVTGTKEQVE-AAKFHIQK-----VSEEEQSLQQRAAESSAFRCRRKELISVKKKEAQEANSR 246

  Fly  1000 TPPVTPEKKPSARSTGSTF------SSLMLKD--YEAIP-----------AVGAYFEVRVALSVN 1045
            ...:..||:..|...|.:.      |...:.|  || :|           ....|.:|.|:...|
 Frog   247 GSGIQEEKRGGAEPIGESLHRGNPPSKENVTDTTYE-VPRFEVSSPEYPFRADEYVDVYVSAVEN 310

  Fly  1046 PGHFAVQPY-KYYNQLQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAP-DSEGVYHRVSIHKIY 1108
            |.||.:|.. ....||..|...:.||.|.... ||  :::.:|:..||| .|:..::|..:....
 Frog   311 PEHFWIQILGSRSTQLDKLTSEMTEHYQDKKG-GV--AEIQVGDIVAAPFRSDYFWYRAKVAGFL 372

  Fly  1109 DE-IIHVRFVDVGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDVVWSKENCVRFRELS 1171
            :. .:.:.:||.||:..:..::|..|..:...||..|:...|..:......|::|..:.|.:|:
 Frog   373 ENGNVDLYYVDYGDNWDVGREKLFPLRHDFLSLPFQAIECGLSKVSPNGGAWTEEALLYFEDLT 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754
TUDOR 769..896 CDD:425754
TUDOR 1034..1151 CDD:425754 32/119 (27%)
tdrkhXP_031747152.1 KH_1 70..130 CDD:459630
KH-I 138..220 CDD:469614 10/37 (27%)
Tudor_TDRD2 321..413 CDD:410483 23/94 (24%)
Blue background indicates that the domain is not in the aligned region.

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