DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11200 and AT4G24050

DIOPT Version :10

Sequence 1:NP_611471.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_194136.1 Gene:AT4G24050 / 828505 AraportID:AT4G24050 Length:332 Species:Arabidopsis thaliana


Alignment Length:278 Identity:90/278 - (32%)
Similarity:134/278 - (48%) Gaps:20/278 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AVITGGNRGIGLRIVEKLLACDMTVVMGVRDPKIAETAVASIVDLNATKGKLICEQLDVGDLKSV 134
            |||||...|||......|......::...|:.|.||.|...||. ...:.:::..:||:..:.||
plant    37 AVITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVS-EFPETEIVVMKLDLSSIASV 100

  Fly   135 KAFAQLIKERYSKVDLLLNNAGIMFAPFKLTADGYESHFAINFLGHFLLTHLLL-PQLRAAGKEG 198
            :.|....:.....::||:||||.:.....::.||.|..||.|:|||||||:||| ..::.|.:.|
plant   101 RNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETG 165

  Fly   199 RNSRIVNVSSCV------NLIGRINYKDINGTKHYYPGT-AYSQSKLAQILFTRHLQTLLDAEKS 256
            ...|||||:|.:      :||..:..  |:..|..:..| ||:.||||.:|.|:.|.:.|....:
plant   166 VQGRIVNVTSGIHGWFSGDLIEYLRL--ISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGA 228

  Fly   257 HVQVNVVHPGIVDTDLF---EHSATTSVPIFKKLFFKTPERGSRTVVFAAIDPSIEGQGGTYLSN 318
            :|.||.||||:|.|.|.   |...|..|........||..:.:.|..:.|.:|.:....|.|.::
plant   229 NVTVNCVHPGVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTD 293

  Fly   319 ------GGKGPFHPDAKK 330
                  .|.|....:|.|
plant   294 CNETTPSGLGTNSSEATK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11200NP_611471.1 Rossmann-fold NAD(P)(+)-binding proteins 67..338 CDD:473865 90/278 (32%)
AT4G24050NP_194136.1 retinol-DH_like_SDR_c_like 36..313 CDD:212492 90/278 (32%)

Return to query results.
Submit another query.