DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11200 and Tic32-IVa

DIOPT Version :10

Sequence 1:NP_611471.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_849428.1 Gene:Tic32-IVa / 828442 AraportID:AT4G23430 Length:322 Species:Arabidopsis thaliana


Alignment Length:299 Identity:97/299 - (32%)
Similarity:143/299 - (47%) Gaps:25/299 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AVITGGNRGIGLRIVEKLLACDMTVVMGVRD----PKIAETAVASIVDLNATKGKLICEQLDVGD 130
            |::||.:.|||:.....|....:.|||.||:    .|:.|..|..:     ...||...:||:..
plant    32 AIVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQV-----PGAKLDVMELDLSS 91

  Fly   131 LKSVKAFAQLIKERYSKVDLLLNNAGIMFAPFKLTADGYESHFAINFLGHFLLTHLLLPQLRAAG 195
            ::||:.||...|.....::||:||||||..||.|:.|..|..||.|.|||||||.|||..:::..
plant    92 MQSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTS 156

  Fly   196 KEG-RNSRIVNVSSCVNLIGRINYKD------INGTKHYYPGTAYSQSKLAQILFTRHLQTLLDA 253
            :|. |..||||:||..:   |.:|.:      ||....|....||.||||..:|....|...|..
plant   157 RESKREGRIVNLSSEAH---RFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKE 218

  Fly   254 EKSHVQVNVVHPGIVDTDL---FEHSATTSVPIFKKLFFKTPERGSRTVVFAAIDPSIEGQGGTY 315
            :..::..|.:|||.:.|:|   |......:|....|...|:..:|:.|..:.|::|.:.|..|.|
plant   219 DGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEY 283

  Fly   316 LSNGGKGPFHPDAKKPAKCEQLFQFSCDLLKIQQYGNGE 354
            ..:.......|..|.....::::.||..|...|   :||
plant   284 FQDSNIAKPLPLVKDTELAKKVWDFSTKLTDSQ---SGE 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11200NP_611471.1 Rossmann-fold NAD(P)(+)-binding proteins 67..338 CDD:473865 91/281 (32%)
Tic32-IVaNP_849428.1 retinol-DH_like_SDR_c_like 29..306 CDD:212492 91/281 (32%)

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