DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11200 and rdh12

DIOPT Version :9

Sequence 1:NP_001286630.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001002325.1 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:319 Species:Danio rerio


Alignment Length:320 Identity:111/320 - (34%)
Similarity:165/320 - (51%) Gaps:27/320 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LGIVGLV----------HDAQYKARDRVALYKQPDRIAVITGGNRGIGLRIVEKLLACDMTVVMG 97
            ||:|.|:          :.|....|..|.|   ..::|::||.|.|||......|.:....|::.
Zfish    11 LGLVALILRLLSPQIRKYAAGGSCRSTVRL---DGKVALVTGANSGIGKETALDLASRGARVILA 72

  Fly    98 VRDPKIAETAVASIVDLNATK---GKLICEQLDVGDLKSVKAFAQLIKERYSKVDLLLNNAGIMF 159
            .||.:.||.|.|.|    .|:   .|:...:||:.|..|::||||........:.:|:||||:|.
Zfish    73 CRDLEKAEEAAAEI----RTRVGGAKVEVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMM 133

  Fly   160 APFKLTADGYESHFAINFLGHFLLTHLLLPQLRAAGKEGRNSRIVNVSSCVNLIGRINYKDINGT 224
            .|:..||||:|....:|.|||:|||:||:..|    |....||||.|||..:..|.|.:.|::..
Zfish   134 CPYMKTADGFEMQIGVNHLGHYLLTYLLIGLL----KRSAPSRIVVVSSLAHNFGWIRFHDLHSQ 194

  Fly   225 KHYYPGTAYSQSKLAQILFTRHLQTLLDAEKSHVQVNVVHPGIVDTDLFEHSATTSVPI-FKKLF 288
            ..|..|.||.|||||.:||||.|...|  :.|:|.||.||||.|.::|..||...|:.. |..:|
Zfish   195 GSYNSGLAYCQSKLANVLFTRELARRL--QGSNVTVNSVHPGTVRSELVRHSTLMSLLFAFFSMF 257

  Fly   289 FKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKPAKCEQLFQFSCDLLKIQ 348
            .|:|:.|::|.::.|:...::...|.:.|:.......|..:......:|:..||:||.|:
Zfish   258 LKSPKEGAQTSIYCAVAEELQSISGKHFSDCAPAFVAPQGRSEETARKLWDVSCELLGIE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11200NP_001286630.1 PRK06196 56..344 CDD:235736 103/291 (35%)
NADB_Rossmann 67..338 CDD:304358 97/274 (35%)
rdh12NP_001002325.1 PRK06197 41..318 CDD:235737 103/287 (36%)
NADB_Rossmann 42..310 CDD:304358 98/277 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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