DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11200 and rdh12

DIOPT Version :10

Sequence 1:NP_611471.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001002325.2 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:320 Species:Danio rerio


Alignment Length:320 Identity:111/320 - (34%)
Similarity:165/320 - (51%) Gaps:27/320 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LGIVGLV----------HDAQYKARDRVALYKQPDRIAVITGGNRGIGLRIVEKLLACDMTVVMG 97
            ||:|.|:          :.|....|..|.|   ..::|::||.|.|||......|.:....|::.
Zfish    12 LGLVALILRLLSPQIRKYAAGGSCRSTVRL---DGKVALVTGANSGIGKETALDLASRGARVILA 73

  Fly    98 VRDPKIAETAVASIVDLNATK---GKLICEQLDVGDLKSVKAFAQLIKERYSKVDLLLNNAGIMF 159
            .||.:.||.|.|.|    .|:   .|:...:||:.|..|::||||........:.:|:||||:|.
Zfish    74 CRDLEKAEEAAAEI----RTRVGGAKVEVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMM 134

  Fly   160 APFKLTADGYESHFAINFLGHFLLTHLLLPQLRAAGKEGRNSRIVNVSSCVNLIGRINYKDINGT 224
            .|:..||||:|....:|.|||:|||:||:..|    |....||||.|||..:..|.|.:.|::..
Zfish   135 CPYMKTADGFEMQIGVNHLGHYLLTYLLIGLL----KRSAPSRIVVVSSLAHNFGWIRFHDLHSQ 195

  Fly   225 KHYYPGTAYSQSKLAQILFTRHLQTLLDAEKSHVQVNVVHPGIVDTDLFEHSATTSVPI-FKKLF 288
            ..|..|.||.|||||.:||||.|...|  :.|:|.||.||||.|.::|..||...|:.. |..:|
Zfish   196 GSYNSGLAYCQSKLANVLFTRELARRL--QGSNVTVNSVHPGTVRSELVRHSTLMSLLFAFFSMF 258

  Fly   289 FKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKPAKCEQLFQFSCDLLKIQ 348
            .|:|:.|::|.::.|:...::...|.:.|:.......|..:......:|:..||:||.|:
Zfish   259 LKSPKEGAQTSIYCAVAEELQSISGKHFSDCAPAFVAPQGRSEETARKLWDVSCELLGIE 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11200NP_611471.1 Rossmann-fold NAD(P)(+)-binding proteins 67..338 CDD:473865 97/274 (35%)
rdh12NP_001002325.2 Rossmann-fold NAD(P)(+)-binding proteins 43..311 CDD:473865 98/277 (35%)

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