DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11200 and Cbr3

DIOPT Version :10

Sequence 1:NP_611471.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001100580.1 Gene:Cbr3 / 304078 RGDID:1309728 Length:277 Species:Rattus norvegicus


Alignment Length:303 Identity:81/303 - (26%)
Similarity:119/303 - (39%) Gaps:83/303 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RIAVITGGNRGIGLRIVEKLLAC---DMTVVMGVRDPKIAETAVASIVDLNATKGKLICEQLDVG 129
            |:|::||.|:|||..|...|  |   ...||:..||......||.   .|.|........|||:.
  Rat     6 RVALVTGANKGIGFAITRDL--CRKFSGDVVLTARDEARGRAAVK---QLQAEGLSPRFHQLDID 65

  Fly   130 DLKSVKAFAQLIKERYSKVDLLLNNAGIMF-----APFKLTADGYESHFAINFLGHFLLTHLLLP 189
            :.:|::|....:::.|..:::|:|||||.|     .||.:.|   |.....||.....:...|||
  Rat    66 NPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDVQA---EVTLKTNFFATRNVCTELLP 127

  Fly   190 QLRAAGKEGRNSRIVNVSSCVNLIGRIN-----------------------YKDINGTKHY---- 227
            .::..|      |:|||||...|....|                       .|.:..||:.    
  Rat   128 IMKPHG------RVVNVSSLQGLKALENCSEDLQERFRCDTLTEGDLVDLMKKFVEDTKNEVHER 186

  Fly   228 --YPGTAYSQSKLAQILFTRHLQTLLDAEK--SHVQVNVVHPGIVDTDLFEHSATTSVPIFKKLF 288
              :|.:||..|||...:.||.|...||.::  ..:.:|...||.|.||:.....:          
  Rat   187 EGWPDSAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQGS---------- 241

  Fly   289 FKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKP 331
             :|.|.|:.|.|:.|:.|                   |||.:|
  Rat   242 -RTVEEGAETPVYLALLP-------------------PDATEP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11200NP_611471.1 Rossmann-fold NAD(P)(+)-binding proteins 67..338 CDD:473865 81/303 (27%)
Cbr3NP_001100580.1 carb_red_PTCR-like_SDR_c 6..277 CDD:187585 81/303 (27%)

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