DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta2 and Csnk2b

DIOPT Version :9

Sequence 1:NP_477407.1 Gene:CkIIbeta2 / 37300 FlyBaseID:FBgn0026136 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_006256143.1 Gene:Csnk2b / 81650 RGDID:619978 Length:235 Species:Rattus norvegicus


Alignment Length:198 Identity:130/198 - (65%)
Similarity:156/198 - (78%) Gaps:2/198 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDSDESSWIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILDLNPGSASED- 64
            |:.|:|.|||.|||..|||||||||||:||||||||..|:..|.:|:.||::||||.|....|| 
  Rat    21 MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDN 85

  Fly    65 PAEPEL-EASAEKLYGLIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVLPIGLSDNPGE 128
            |.:.:| |.:||.||||||||:|||||||..||:||.:|:||.|||.:|.:||:|||||||.|||
  Rat    86 PNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGE 150

  Fly   129 DMVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAKQKFVPRLYGFKIHPT 193
            .||::|||||.|||.||:|||.:.|||:||||||||.||..|:.||||...:||||||||||||.
  Rat   151 AMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPM 215

  Fly   194 AYR 196
            ||:
  Rat   216 AYQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbeta2NP_477407.1 CK_II_beta 9..189 CDD:279546 119/181 (66%)
Csnk2bXP_006256143.1 CK_II_beta 28..211 CDD:198153 120/182 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53662
OrthoDB 1 1.010 - - D1335521at2759
OrthoFinder 1 1.000 - - FOG0001997
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100687
Panther 1 1.100 - - O PTHR11740
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1673
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.790

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