DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta2 and Ssl

DIOPT Version :10

Sequence 1:NP_477407.1 Gene:CkIIbeta2 / 37300 FlyBaseID:FBgn0026136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523848.2 Gene:Ssl / 37909 FlyBaseID:FBgn0015300 Length:219 Species:Drosophila melanogaster


Alignment Length:217 Identity:98/217 - (45%)
Similarity:131/217 - (60%) Gaps:30/217 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ESSWIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILDLNPGSASEDPAEPEL 70
            :.|||.||...:|:||.|.|..|||||||||..|:.:.:    .|||:||            ||.
  Fly    11 DGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLEFDSQ----TLEVVLD------------PEF 59

  Fly    71 E------ASAEKLYGLIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVLPIGLSDNPGED 129
            :      |..:||||:||||:|::.||||.|..||.:|:||:|||.||..|.|||:||.|...:.
  Fly    60 DNEDWDCAEEKKLYGMIHARYIVSPRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKA 124

  Fly   130 MVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAKQKFVPRLYGFKIHPTA 194
            .|:||||.||:|||| ...:..||||.|||.|||||||:.|...|....:|::||:|||::|..|
  Fly   125 QVKIYCPSCNNVYIP-LPHNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKA 188

  Fly   195 YR--TAAE-----IQKDVTMTP 209
            ..  .:||     ::..|:.:|
  Fly   189 LMPPESAESPPIKVESSVSKSP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbeta2NP_477407.1 CK_II_beta 8..189 CDD:198153 91/186 (49%)
SslNP_523848.2 CK_II_beta 13..183 CDD:198153 91/186 (49%)

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