DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta2 and ckb1

DIOPT Version :10

Sequence 1:NP_477407.1 Gene:CkIIbeta2 / 37300 FlyBaseID:FBgn0026136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001342935.1 Gene:ckb1 / 2542564 PomBaseID:SPAC1851.03 Length:231 Species:Schizosaccharomyces pombe


Alignment Length:192 Identity:98/192 - (51%)
Similarity:140/192 - (72%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TDSDESS-WIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILD-LNPGSASED 64
            ::||:|. |:.||...:||||||||||::|||:|||..|...|.:|..:|::||| |:|....| 
pombe     8 SESDDSQYWVDWFLGLKGNEFFCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLILDVLDPDLPEE- 71

  Fly    65 PAEPELEASAEKLYGLIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVLPIGLSDNPGED 129
             .:.|:||||..||||||||:|||.:|:..||:||.|.:||.|||..|:.||:||:||||.....
pombe    72 -VQDEVEASARHLYGLIHARYILTAQGLYKMLEKYKKCDFGHCPRVLCNGQPMLPVGLSDIAHTK 135

  Fly   130 MVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAKQKFVPRLYGFKIH 191
            .|::|||:|.|||.||:.||:::|||:|||.||||.|...|:....:::::::||::|||:|
pombe   136 SVKLYCPRCEDVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELAVPKSQERYIPRIFGFKVH 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbeta2NP_477407.1 CK_II_beta 8..189 CDD:198153 92/182 (51%)
ckb1NP_001342935.1 SKB2 16..231 CDD:227374 95/184 (52%)

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