DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta2 and ckb1

DIOPT Version :9

Sequence 1:NP_477407.1 Gene:CkIIbeta2 / 37300 FlyBaseID:FBgn0026136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001342935.1 Gene:ckb1 / 2542564 PomBaseID:SPAC1851.03 Length:231 Species:Schizosaccharomyces pombe


Alignment Length:192 Identity:98/192 - (51%)
Similarity:140/192 - (72%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TDSDESS-WIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILD-LNPGSASED 64
            ::||:|. |:.||...:||||||||||::|||:|||..|...|.:|..:|::||| |:|....| 
pombe     8 SESDDSQYWVDWFLGLKGNEFFCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLILDVLDPDLPEE- 71

  Fly    65 PAEPELEASAEKLYGLIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVLPIGLSDNPGED 129
             .:.|:||||..||||||||:|||.:|:..||:||.|.:||.|||..|:.||:||:||||.....
pombe    72 -VQDEVEASARHLYGLIHARYILTAQGLYKMLEKYKKCDFGHCPRVLCNGQPMLPVGLSDIAHTK 135

  Fly   130 MVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAKQKFVPRLYGFKIH 191
            .|::|||:|.|||.||:.||:::|||:|||.||||.|...|:....:::::::||::|||:|
pombe   136 SVKLYCPRCEDVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELAVPKSQERYIPRIFGFKVH 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbeta2NP_477407.1 CK_II_beta 9..189 CDD:279546 92/180 (51%)
ckb1NP_001342935.1 SKB2 16..231 CDD:227374 95/184 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 243 1.000 Domainoid score I437
eggNOG 1 0.900 - - E1_COG5041
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I776
OMA 1 1.010 - - QHG53662
OrthoFinder 1 1.000 - - FOG0001997
OrthoInspector 1 1.000 - - otm47317
orthoMCL 1 0.900 - - OOG6_100687
Panther 1 1.100 - - O PTHR11740
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1673
TreeFam 1 0.960 - -
1211.830

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