DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16868 and CG4587

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster


Alignment Length:1175 Identity:209/1175 - (17%)
Similarity:375/1175 - (31%) Gaps:424/1175 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLLILAVLACPTSSQHVPLAMANSTSNQVPTDPGFMPLQQSPGSVFFVHHNQQNAMQLRHSMEGK 74
            |.::|.||   ....|:.:|.|:...:                    :.||:             
  Fly    10 VAIVLGVL---IFKMHIFVAFADQDED--------------------IPHNE------------- 38

  Fly    75 LRNIRNTELRVA----KIQEIFDSMHFSSAKGASNTRQASSNDSNVVNPQLQRDLQLFSE----- 130
               :||..|:..    :....|..|:...::...|..:....|..::..:|..:::.|.:     
  Fly    39 ---VRNWALKFGVDLWEFGRQFTKMNEIKSRFKDNDIEVKRKDGIILLRELAAEVKNFMDFKRNA 100

  Fly   131 --RLSKKIQKATYVVLE--------LRELLRYNLTKVWQYSYDDEDDESESEMDLEM--ELEDLH 183
              ||....::|....||        :.....|:..::.:|:.|.:..:....||:..  ..|.|.
  Fly   101 VMRLMDSAEQAALSELEGQGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIRFMRRFERLP 165

  Fly   184 ARNTASPTDEHVQLYLNTQIESCQPDYETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLN 248
            ...:.|      .:.:...::..:||.::.|::..........|.:|...|::            
  Fly   166 VNLSLS------SILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSW------------ 212

  Fly   249 ENNARSLAVNGYISNQLVLLKRRLSRS-DAENSNSKPISGNHFKHIYFLSNSDGASASLHFRQLY 312
                      .|..:....|:|....: ..|.|....:..:...|.:|:.               
  Fly   213 ----------QYFGSSTGFLRRFPGTAWPPEGSKGSKLIHDFRTHNWFVQ--------------- 252

  Fly   313 VSAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMSLEAFPAEA 377
             :|...|.::.|:|..|:::.:.|||..:....:|..|.:.|.|:|:|. ||.....:..|... 
  Fly   253 -AASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDDFVNLITF-SEVVKTPVPCFKDR- 314

  Fly   378 GHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLHRLQQSG---------------- 426
               :..||..:.:||.|.:.:: :.|...|.:.|.||:|.|||:..|||                
  Fly   315 ---MVRATPDNIQEIKSAVKAI-KLQDTANFTAGLEYAFSLLHKYNQSGAGSQCNQAIMLITEST 375

  Fly   427 ---------MINTAEQPVE-FVYI-----------------TRGLLTNLSDAMAVLRVVADGQRR 464
                     ..|....||. |.|:                 .:|....::|.....|.|.|    
  Fly   376 SESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKGFFVQINDYDEARRKVID---- 436

  Fly   465 LRAPVIINTCAVVLDEKRIMYEKQFLNDVASQNYTKYEIDVASWWPSGQEASELVGRFYVLSKMH 529
                     .|:|:....|||:..               ....|.|           .:|..|  
  Fly   437 ---------YALVMARPMIMYQAD---------------HPVHWSP-----------VFVAGK-- 464

  Fly   530 AETSLPQTSSRIFGPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPYGVVGVNLYLSDLLE 594
             ...|.:.|.      :|.|.::   .|..||.|..:..|.|:..     .||||.::.:.::.:
  Fly   465 -SGGLGRDSE------YQRRLVT---TVSTPVFDRRNHSVRVANL-----LGVVGTDVPIEEIRK 514

  Fly   595 DLLNYPSTTSSAKQG-LGYAFLLDRSTGNTLAHPAFPRPL-------IQRETSY-PVNIAYLE-N 649
            .:..:       |.| .||:|::| :.|..|.||.. |||       .|.:..| .|:|..|| .
  Fly   515 VIPQH-------KLGPNGYSFIVD-NNGRVLYHPDL-RPLGDANQYIDQLKPKYASVDITELELP 570

  Fly   650 ATDFSSH-----IRDRLLRE----------------------ESGNVTTDV-------------- 673
            .|:|.::     |...||.|                      :|..|:|..              
  Fly   571 ETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRTHRYFYGPIEDTPFT 635

  Fly   674 -------------YVGRQRLQRT------YY----WQSVLGFYVLCLVSSGGDTLRNVSSTQRYN 715
                         :|.:|.::.:      |:    |: |...:|.|..:|..|..:...|:..|:
  Fly   636 LAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFKGDNWR-VHPDWVYCEYNSVSDLEKERESSGEYS 699

  Fly   716 LKDTVSNYEPGYYGESMDLLYHRLDL-------------------------NQGGSAPPKTCRYF 755
            .:|    .||. :|...:.:.|.|..                         :.||:||.      
  Fly   700 SRD----QEPS-FGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPHHNMHSGSNGGNAPG------ 753

  Fly   756 RQVATMDAPTLFLSAAAFESPFGFLHNNRPRTQLRHVES-------IMAYLRD---SSGLLANMG 810
                              .|.||..|.:...:  |..|.       :.:.:||   :.||..|..
  Fly   754 ------------------SSHFGSQHQSSQGS--RKAEPYFCDRALLQSLVRDAMVTDGLDRNTT 798

  Fly   811 LRPSIRHEVGVLYQAMQQLRRRHQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRP- 874
            ...|.:.:...:...|..|:|     :|..:..|...::|:.||:|:.         .|..:|| 
  Fly   799 GSSSGKEDKHPIATLMAILKR-----QGYQKFVVATSFVATRSGLLRW---------IDHVKRPE 849

  Fly   875 ------------------WFRQAIAQ----PGKIVSTAPYLDAGGAGY-------IITIAHTIFE 910
                              |:::||.|    |...|.:.|:    |:||       ::|.:|.|| 
  Fly   850 DTPEPHFSEDNVRAMDTSWYKRAIDQHSVEPDSFVYSVPF----GSGYAIKSNATLVTASHAIF- 909

  Fly   911 GKAHALHSAQQDRPVAVVALDVPYAFYYRLILEGTP----------ICQLPHIKCLLFEHEGYLL 965
             ..|..|.|    ...||.|...:....:..:..|.          .|...::.|.:.::.|:::
  Fly   910 -VEHRGHKA----AAGVVGLQFQHDSLAKHFINITSACTGMTGCKRTCASDNLDCYVLDNSGFVI 969

  Fly   966 AHPSM 970
            ....|
  Fly   970 ISEEM 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 32/117 (27%)
Cache_1 559..627 CDD:280839 17/68 (25%)
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 20/149 (13%)
vWA_VGCC_like 245..428 CDD:238740 43/204 (21%)
Cache_1 456..544 CDD:280839 28/124 (23%)
VGCC_alpha2 590..>647 CDD:285647 4/56 (7%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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