DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and Cacna2d3

DIOPT Version :10

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:XP_063131356.1 Gene:Cacna2d3 / 306243 RGDID:631361 Length:1091 Species:Rattus norvegicus


Alignment Length:1128 Identity:215/1128 - (19%)
Similarity:400/1128 - (35%) Gaps:338/1128 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 RYNLTKVWQYSYDD-EDDESESEMD-------LEMELEDL-HARNTASPTDEHVQLYLNTQIESC 206
            :|:.:::.|..|.: |.|.:..|:|       |...:|:: |.::.|          :...:|:.
  Rat    59 KYSGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEA----------VRRLVEAA 113

  Fly   207 QP-----DYETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLNENNARSLAVNGYISNQLV 266
            :.     :::.||:|.       ::|...|      ...|....||.......||.|.:.:|   
  Rat   114 EEAHLKHEFDADLQYE-------YFNAVLI------NERDKDGNFLELGKEFILAPNDHFNN--- 162

  Fly   267 LLKRRLSRSDAE------NSNSKPISGNHFK---HIYFLSNSDG---------ASASLHFRQL-- 311
             |...:|.||.:      |.:...::|.::.   :..|:.|.|.         .||...|||.  
  Rat   163 -LPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPG 226

  Fly   312 --------------------YV-SAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDK 355
                                |: :|...|.|:.|:||..::......::|..|..:|..|.|.|.
  Rat   227 IKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDF 291

  Fly   356 VSLVTVASEANFMSLEAFPAEAGHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLH 420
            .:::|...|.:::.    |...| .:..|.|.:||.....::.|. |:......:....:|.:|.
  Rat   292 FNIITYNEELHYVE----PCLNG-TLVQADRTNKEHFREHLDKLF-AKGIGMLDIALNEAFNVLS 350

  Fly   421 RLQQSGMINTAEQPVEFVYITRGLLTNLSDAMAVLRVVADGQRRLRA-PVIINTCAVVLDEKRIM 484
            ....:|..:...|.:  :.||.|.:.......|....   .:|::|. ..:|...|...|..:.|
  Rat   351 DFNHTGQGSICSQAI--MLITDGAVDTYDTIFAKYNW---PERKVRIFTYLIGREAAFADNLKWM 410

  Fly   485 --YEKQFLNDVAS-----QNYTKYEIDVASWWPSGQEASELVGRFYVLSKMHAETSLPQTSSRIF 542
              ..|.|...:::     :|..:|                    .:|||:       |:...:..
  Rat   411 ACANKGFFTQISTLADVQENVMEY--------------------LHVLSR-------PKVIDQEH 448

  Fly   543 GPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPY-------------GVVGVNLYLSDLLE 594
            ..::.|.|:..||.....:.| |.|.||:: |.|:|.:             ||||.::.:.:||:
  Rat   449 DVVWTEAYIDSTLPQAQKLAD-DQGLVLMT-TVAMPVFSKQNETRSKGILLGVVGTDVPVKELLK 511

  Fly   595 DLLNYPSTTSSAKQGL-GYAFLLDRSTGNTLAHPAFPRPLIQ-----RETSY-PVNIAYLENATD 652
            .:..|       |.|: ||||.: .:.|..|.||.. |||.:     |:.:| .|:::.:| ..|
  Rat   512 TIPKY-------KLGIHGYAFAI-TNNGYILTHPEL-RPLYEEGKKRRKPNYSSVDLSEVE-WED 566

  Fly   653 FSSHIRDRLLREESGNVTTDVY----VGRQRLQRT--YYWQSVLG--FYVLCLVSSGGDTLRNVS 709
            ....:|:.::..::|..:.:|.    .|::.|..|  ||:..:.|  |.:...:|.|..      
  Rat   567 RDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGAPFSLGVALSRGHG------ 625

  Fly   710 STQRYNLKDTVSNYEPGYYGESMDL------LYHRLDLNQGGSAPPKTCRYFRQVATMDAPTLFL 768
               :|..:..|:..|..:..|..|:      .|...||:      |:    .|.::.::|..|:|
  Rat   626 ---KYFFRGNVTIEEGLHDLEHPDVSLADEWSYCNTDLH------PE----HRHLSQLEAIKLYL 677

  Fly   769 S----------------------AAAFESPFGFLHNNRPRTQLRHVESIMAYLRDSSGLLANMGL 811
            .                      :|..|:.:..|..|:.....:.||  :|:|...:||      
  Rat   678 KGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSDKGVE--VAFLGTRTGL------ 734

  Fly   812 RPSIRHEVGVLYQAMQQLRRRHQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRPWF 876
                 ..:.:...|.|...:....||....                     :.::.:.|.   |:
  Rat   735 -----SRINLFVGAEQLTNQDFLKARDKEN---------------------IFNADHFPL---WY 770

  Fly   877 RQAIAQ-PGKIVSTAPYLDAG--GAGYIITIAHTIFEGKAHALHSAQQDRPVAVVALDVPYAFYY 938
            |:|..| ||..|.:.|: ..|  ....::|.:.:|      .|...::...||.|.:.:...|:.
  Rat   771 RRAAEQIPGSFVYSIPF-STGTVNKSNVVTASTSI------QLLDERKSPVVAAVGIQMKLEFFQ 828

  Fly   939 RLI---------LEG--TPICQLPHIKCLLFEHEGYLLAHPSMLQP---------ATLTK----- 978
            |..         |:|  :..|....:.|.|.::.|::|......|.         |.:.|     
  Rat   829 RKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVSEDYTQTGDFFGEVEGAVMNKLLTMG 893

  Fly   979 ----------------NQRR---------PHEHLTHKESYLANDMLN-----------HGQLVRK 1007
                            |:..         |::.......::..:::.           |..:..|
  Rat   894 SFKRITLYDYQAMCRANKESSDSAHGLLDPYKAFLSAAKWIVTELVLFLVEFNLCSWWHSDMTAK 958

  Fly  1008 LGCASYQNRTLQ----RYYAF--NTSLSSILGNVVHGERTK-YAIALIRGSNLFAAVLNSSCDGG 1065
               |....:||:    .|.||  ..::....||:...:.:| :.|..|..||||..|::|||...
  Rat   959 ---AQKLKQTLEPCDTEYPAFVSERTIKETTGNIACEDCSKSFVIQQIPSSNLFMVVVDSSCLCE 1020

  Fly  1066 AFCPCSTID-----RECLNCKRM 1083
            :..|.:...     .|.|.|:|:
  Rat  1021 SVAPITMAPIEIRYNESLKCERL 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:469594 28/140 (20%)
HK_sensor <867..933 CDD:365792 16/68 (24%)
Cacna2d3XP_063131356.1 None

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