DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and Cacna2d3

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:XP_017455566.2 Gene:Cacna2d3 / 306243 RGDID:631361 Length:1091 Species:Rattus norvegicus


Alignment Length:1128 Identity:215/1128 - (19%)
Similarity:400/1128 - (35%) Gaps:338/1128 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 RYNLTKVWQYSYDD-EDDESESEMD-------LEMELEDL-HARNTASPTDEHVQLYLNTQIESC 206
            :|:.:::.|..|.: |.|.:..|:|       |...:|:: |.::.|          :...:|:.
  Rat    59 KYSGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEA----------VRRLVEAA 113

  Fly   207 QP-----DYETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLNENNARSLAVNGYISNQLV 266
            :.     :::.||:|.       ::|...|      ...|....||.......||.|.:.:|   
  Rat   114 EEAHLKHEFDADLQYE-------YFNAVLI------NERDKDGNFLELGKEFILAPNDHFNN--- 162

  Fly   267 LLKRRLSRSDAE------NSNSKPISGNHFK---HIYFLSNSDG---------ASASLHFRQL-- 311
             |...:|.||.:      |.:...::|.::.   :..|:.|.|.         .||...|||.  
  Rat   163 -LPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPG 226

  Fly   312 --------------------YV-SAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDK 355
                                |: :|...|.|:.|:||..::......::|..|..:|..|.|.|.
  Rat   227 IKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDF 291

  Fly   356 VSLVTVASEANFMSLEAFPAEAGHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLH 420
            .:::|...|.:::.    |...| .:..|.|.:||.....::.|. |:......:....:|.:|.
  Rat   292 FNIITYNEELHYVE----PCLNG-TLVQADRTNKEHFREHLDKLF-AKGIGMLDIALNEAFNVLS 350

  Fly   421 RLQQSGMINTAEQPVEFVYITRGLLTNLSDAMAVLRVVADGQRRLRA-PVIINTCAVVLDEKRIM 484
            ....:|..:...|.:  :.||.|.:.......|....   .:|::|. ..:|...|...|..:.|
  Rat   351 DFNHTGQGSICSQAI--MLITDGAVDTYDTIFAKYNW---PERKVRIFTYLIGREAAFADNLKWM 410

  Fly   485 --YEKQFLNDVAS-----QNYTKYEIDVASWWPSGQEASELVGRFYVLSKMHAETSLPQTSSRIF 542
              ..|.|...:::     :|..:|                    .:|||:       |:...:..
  Rat   411 ACANKGFFTQISTLADVQENVMEY--------------------LHVLSR-------PKVIDQEH 448

  Fly   543 GPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPY-------------GVVGVNLYLSDLLE 594
            ..::.|.|:..||.....:.| |.|.||:: |.|:|.:             ||||.::.:.:||:
  Rat   449 DVVWTEAYIDSTLPQAQKLAD-DQGLVLMT-TVAMPVFSKQNETRSKGILLGVVGTDVPVKELLK 511

  Fly   595 DLLNYPSTTSSAKQGL-GYAFLLDRSTGNTLAHPAFPRPLIQ-----RETSY-PVNIAYLENATD 652
            .:..|       |.|: ||||.: .:.|..|.||.. |||.:     |:.:| .|:::.:| ..|
  Rat   512 TIPKY-------KLGIHGYAFAI-TNNGYILTHPEL-RPLYEEGKKRRKPNYSSVDLSEVE-WED 566

  Fly   653 FSSHIRDRLLREESGNVTTDVY----VGRQRLQRT--YYWQSVLG--FYVLCLVSSGGDTLRNVS 709
            ....:|:.::..::|..:.:|.    .|::.|..|  ||:..:.|  |.:...:|.|..      
  Rat   567 RDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGAPFSLGVALSRGHG------ 625

  Fly   710 STQRYNLKDTVSNYEPGYYGESMDL------LYHRLDLNQGGSAPPKTCRYFRQVATMDAPTLFL 768
               :|..:..|:..|..:..|..|:      .|...||:      |:    .|.::.::|..|:|
  Rat   626 ---KYFFRGNVTIEEGLHDLEHPDVSLADEWSYCNTDLH------PE----HRHLSQLEAIKLYL 677

  Fly   769 S----------------------AAAFESPFGFLHNNRPRTQLRHVESIMAYLRDSSGLLANMGL 811
            .                      :|..|:.:..|..|:.....:.||  :|:|...:||      
  Rat   678 KGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSDKGVE--VAFLGTRTGL------ 734

  Fly   812 RPSIRHEVGVLYQAMQQLRRRHQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRPWF 876
                 ..:.:...|.|...:....||....                     :.::.:.|.   |:
  Rat   735 -----SRINLFVGAEQLTNQDFLKARDKEN---------------------IFNADHFPL---WY 770

  Fly   877 RQAIAQ-PGKIVSTAPYLDAG--GAGYIITIAHTIFEGKAHALHSAQQDRPVAVVALDVPYAFYY 938
            |:|..| ||..|.:.|: ..|  ....::|.:.:|      .|...::...||.|.:.:...|:.
  Rat   771 RRAAEQIPGSFVYSIPF-STGTVNKSNVVTASTSI------QLLDERKSPVVAAVGIQMKLEFFQ 828

  Fly   939 RLI---------LEG--TPICQLPHIKCLLFEHEGYLLAHPSMLQP---------ATLTK----- 978
            |..         |:|  :..|....:.|.|.::.|::|......|.         |.:.|     
  Rat   829 RKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVSEDYTQTGDFFGEVEGAVMNKLLTMG 893

  Fly   979 ----------------NQRR---------PHEHLTHKESYLANDMLN-----------HGQLVRK 1007
                            |:..         |::.......::..:::.           |..:..|
  Rat   894 SFKRITLYDYQAMCRANKESSDSAHGLLDPYKAFLSAAKWIVTELVLFLVEFNLCSWWHSDMTAK 958

  Fly  1008 LGCASYQNRTLQ----RYYAF--NTSLSSILGNVVHGERTK-YAIALIRGSNLFAAVLNSSCDGG 1065
               |....:||:    .|.||  ..::....||:...:.:| :.|..|..||||..|::|||...
  Rat   959 ---AQKLKQTLEPCDTEYPAFVSERTIKETTGNIACEDCSKSFVIQQIPSSNLFMVVVDSSCLCE 1020

  Fly  1066 AFCPCSTID-----RECLNCKRM 1083
            :..|.:...     .|.|.|:|:
  Rat  1021 SVAPITMAPIEIRYNESLKCERL 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 28/140 (20%)
Cache_1 559..627 CDD:280839 23/81 (28%)
Cacna2d3XP_017455566.2 VWA_N 113..229 CDD:400621 26/132 (20%)
vWA_VGCC_like 242..425 CDD:238740 39/193 (20%)
HK_sensor <446..506 CDD:365792 16/61 (26%)
PDC2_MCP_like 508..622 CDD:350337 31/123 (25%)
VGCC_alpha2 655..1068 CDD:400667 78/446 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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