DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and Cacna2d2

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:NP_783182.1 Gene:Cacna2d2 / 300992 RGDID:631360 Length:1157 Species:Rattus norvegicus


Alignment Length:1276 Identity:237/1276 - (18%)
Similarity:433/1276 - (33%) Gaps:468/1276 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MPLQQSPGS---VFFVHHNQQN-AMQLRHSMEGKLRNIRNTELRVAKIQEIFDSMHFSSAKGASN 105
            :||..:||:   .|...|..|: |.:|...::|.:|....    |.:::||:        |...|
  Rat    54 LPLLTAPGASAYSFPQQHTMQHWARRLEQEIDGVMRIFGG----VQQLREIY--------KDNRN 106

  Fly   106 TRQASSNDSNVVNPQLQRDLQLFSERLSKKIQKATYVVLELRELLRYNLTKVWQYSYDDE----- 165
            ......|:...:..::..|::...:|..:.:::........::..|      ||.:..:|     
  Rat   107 LFDVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHR------WQDNIKEEDIMYY 165

  Fly   166 DDESESEMDLEMELEDLHARNTASPTDEHVQLYLNTQIESCQPDYETDLEYGSSSTQSIHYNRQQ 230
            |.::::|:| :.|.||:...:..|      .|.|:. ||  :|:::..:.|.        |...|
  Rat   166 DAKADAELD-DPESEDMERGSKTS------ALRLDF-IE--EPNFKNKVNYS--------YTAVQ 212

  Fly   231 IQILNYLKSDDARATFLNENNARSLAVNGYISNQL---VLLKRRLSRSDAENSNSKPISGNHFKH 292
            |....|..|    ...|||.|......|.:|.|:.   .||.:....:.....            
  Rat   213 IPTDIYKGS----TVILNELNWTEALENVFIENRRQDPTLLWQVFGSATGVTR------------ 261

  Fly   293 IYFLSNSDGASASLHF-----RQLYV-SAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLE 351
             |:.:....|...:..     |..|: .|...|.::.::||..::|.....|.|:.|.|||..|.
  Rat   262 -YYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLS 325

  Fly   352 DTDKVSLVTVASEANFMSLEAFPAEAGHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSF 416
            |.|.|::.:...:|..:|......:|.   ....:..||.:...:     |:..|.:..||||:|
  Rat   326 DDDYVNVASFNEKAQPVSCFTHLVQAN---VRNKKVFKEAVQGMV-----AKGTTGYKAGFEYAF 382

  Fly   417 ELLHRLQQSGMINTAEQPVEFVYITRGLLTNLSDAMAVLRVVADGQRRLRAPVIINTCAVVLDEK 481
            :   :||.|.             |||      ::...::.:..||..               |..
  Rat   383 D---QLQNSN-------------ITR------ANCNKMIMMFTDGGE---------------DRV 410

  Fly   482 RIMYEKQ---------FLNDVASQNYTKYEIDVASWW-----------PS-------GQEASELV 519
            :.::||.         |...|...|   |::....|.           ||       .||..:::
  Rat   411 QDVFEKYNWPNRTVRVFTFSVGQHN---YDVTPLQWMACTNKGYYFEIPSIGAIRINTQEYLDVL 472

  Fly   520 GRFYVLSKMHAETSLPQTSSRIFGPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPY---- 580
            ||..||:.                        .|..:|....|..|:..:.:.:|..:|.:    
  Rat   473 GRPMVLAG------------------------KDAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQ 513

  Fly   581 ------------GVVGVNLYLSDLLEDLLNYPSTTSSAKQGLGYAFLLDRSTGNTLAHPAFPRPL 633
                        ||:|:::.|:|:.....||   |..|.   ||.|.:|.: |..|.||.. :|.
  Rat   514 DGPGDKKNQLILGVMGIDVALNDIKRLTPNY---TLGAN---GYVFAIDLN-GYVLLHPNL-KPQ 570

  Fly   634 IQ--RETSYPVNIAYLENATDFSSHIRDRLLREESGNVTTDVYVGRQRLQRTYYWQSVLGFYVLC 696
            |.  ||   ||.:.:|           |..|.:|:          ::.::|:    .:.|     
  Rat   571 ITNFRE---PVTLDFL-----------DAELEDEN----------KEEIRRS----MIDG----- 602

  Fly   697 LVSSGGDTLRNV--SSTQRYNLKDTVSNY------EPGYYGESMDLLYHRLDLNQGGSAPPKTCR 753
              ..|...:|.:  |..:|| :.:.:.||      ...|   |:.|:           .||.:..
  Rat   603 --DKGHKQIRTLVKSLDERY-IDEVIRNYTWVPIRSTNY---SLGLV-----------LPPYSTY 650

  Fly   754 YFR-----QVATMDAPTL------FLSAAAFES-------PFGF---LHNNRPRTQ-LRHVESIM 796
            |.:     |:..:..|..      ||..::|||       |..:   |:.:...|: |::...:|
  Rat   651 YLQANLSDQILQVKLPISKLKDFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELM 715

  Fly   797 AYLRDSSG-----LLANMGLRPSIRHEVGVLYQAMQQLRRRHQDARGSLRSH-VIRRYIASVSGV 855
            ..:...|.     ||.|:.|      :.|:..|.:::: .|.||    |.:: ::..:.|:..|:
  Rat   716 EKVTPDSKQCNNFLLHNLIL------DTGITQQLVERV-WRDQD----LNTYSLLAVFAATDGGI 769

  Fly   856 LQLYPGCLLSSSYDPTRRP------WFRQAIAQPGKIVSTAPYLDA---------GGAGYIITIA 905
            .:::|.   .::.|.|..|      ::|:::...|.|.. .|:.|:         ...|.:::.|
  Rat   770 TRVFPN---KAAEDWTENPEPFNASFYRRSLDNRGYIFK-PPHQDSLLRPLELENDTVGVLVSTA 830

  Fly   906 HTIFEGKAHALHSAQQDRPVAV-VALDV-PYAFYYRLILEG-------------TPICQL----- 950
            ..:..|:       :..||..| |.||: .:|..::::...             :..|::     
  Rat   831 VELSLGR-------RTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKQCGPSSHCEMDCEVN 888

  Fly   951 -PHIKCLLFEHEGYLLAHPSMLQPATLTKNQRRPHEHL---------------------THKESY 993
             ..:.|:|.:..|:|           :..||....:.:                     |.||||
  Rat   889 NEDLLCVLIDDGGFL-----------VLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKESY 942

  Fly   994 ------------------------LANDMLN-----------------HGQL------------- 1004
                                    ...|.||                 :|.:             
  Rat   943 DYQAACAPQPPGNLGAAPRGVFVPTIADFLNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAE 1007

  Fly  1005 ----VRKLGCASYQNRTLQRYY--AFNTSLSSIL--GN---VVHGERTKYAIALIRGSNLFAAV- 1057
                .|:..|...|.    :||  :.|.|.::|:  ||   :.|.:|       :..:||...| 
  Rat  1008 GSPETRESSCVMKQT----QYYFGSVNASYNAIIDCGNCSRLFHAQR-------LTNTNLLFVVA 1061

  Fly  1058 ---LNSSCDGGAFCPCSTIDRECLNCKRMDQTDCECPCECP 1095
               |.|.|:.|                |:.|.:..||.:.|
  Rat  1062 EKPLCSQCEVG----------------RLLQKETHCPADGP 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 31/123 (25%)
Cache_1 559..627 CDD:280839 19/83 (23%)
Cacna2d2NP_783182.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
VWA_N 144..268 CDD:285584 32/164 (20%)
vWA_VGCC_like 280..459 CDD:238740 47/226 (21%)
MIDAS-like motif 300..304 2/3 (67%)
Cache_1 488..576 CDD:280839 23/95 (24%)
VGCC_alpha2 583..666 CDD:285647 20/129 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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