DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16868 and Cachd1

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:NP_001178687.1 Gene:Cachd1 / 298267 RGDID:1310770 Length:1288 Species:Rattus norvegicus


Alignment Length:1427 Identity:410/1427 - (28%)
Similarity:653/1427 - (45%) Gaps:302/1427 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 MEGKLRNIRNTELRVAKIQEIFDSMHFSSAKGASNTRQASSNDSNVVNPQLQRDLQLFSERLSKK 135
            :..::|.:...||.|..:|.||:|:.:        |.:.|:.:|.|             ::|:||
  Rat    62 LASQMRRLAAEELGVVTMQRIFNSLVY--------TEKISNGESEV-------------QQLAKK 105

  Fly   136 IQKATYVVLELRELLRYNLTKVWQYSYDDEDDESESEMDLEMELEDLHARNTASPTDEHVQLYLN 200
            |::            ::|       .|.|..:.:      :..:|..:..:..||.         
  Rat   106 IRE------------KFN-------RYLDVVNRN------KQVVEASYTAHLTSPL--------- 136

  Fly   201 TQIESC---QPD-YETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLNE---NNARSLAVN 258
            |.|:.|   .|. .|.|..:.::.::::              |.|..:|.:|.   |..|.|   
  Rat   137 TAIQDCCTIPPSMMEFDGNFNTNVSRTV--------------SCDRLSTTVNSRAFNPGRDL--- 184

  Fly   259 GYISNQLVLLKRRLSRSDAENSNSKPISGNHFKHIYFLSNSDG-------------ASASLHFRQ 310
                |.::          |:|..|.|    ..|..|| |:.:|             .|.....|.
  Rat   185 ----NSVL----------ADNLKSNP----GIKWQYF-SSEEGIFTVFPAHKFRCKGSYEHRSRP 230

  Fly   311 LYVSAIK--QKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMSLEAF 373
            :|||.::  .|.::.::|.|::::.....::|.....:|..:::.||:|::|||......||:..
  Rat   231 IYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSLDQC 295

  Fly   374 PAEAGHGIY--SATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLHRLQQSGMINT---AEQ 433
                 :..|  .||...|.::.:|::|:..:.:.|.|::||..:|:|:    :|...||   |..
  Rat   296 -----YKTYLSPATSETKRKMSTFVSSVKPSDSPTQHAVGFHRAFQLI----RSTSNNTRFQANT 351

  Fly   434 PVEFVYITRGLLTNLS---DAMAVLRVVADGQRRLRAPVIINTCAVVLDEKRIMYEKQFLNDVAS 495
            .:..:|::.|:.:..|   |..|.|||:.:....|...|:|.|.|::.|....:.|..||.|:|.
  Rat   352 DMVIIYLSAGITSKDSSEEDKKATLRVINEENGFLNNSVMILTYALMNDGVTGLKELAFLRDLAE 416

  Fly   496 QNYTKYEIDVASWWP------------SGQEASELVGRFYVLSKMHAETSLP--QTSSRIFGPLF 546
            ||..||.|...:..|            |..|.:  |||||        |:||  .....:|...|
  Rat   417 QNSGKYGIPDRTALPVIKGSMMVLNQLSNLETT--VGRFY--------TNLPNRMIDEAVFSLPF 471

  Fly   547 QERYLSDTLEVHPPVVDADSGDVLVSITHAVPPY------GVVGVNLYLSDLLEDLLNYPSTTSS 605
            .:                :.||.|: :|.:.|.|      |:|||::.|:.:|||:..|..:.:|
  Rat   472 SD----------------EMGDGLI-MTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLAS 519

  Fly   606 AKQGLGYAFLLDRSTGNTLAHPAFPRPLIQRETSYPVNIAYLENATDFSSHIRDRLLREESGNVT 670
                  |.||:| ..|.||.||:..||.:..|.....:|.:.||...|.. :|..:|....|:..
  Rat   520 ------YTFLID-DKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFEL-VRQNILSLPLGSQI 576

  Fly   671 TDVYV--------------GRQRLQRTYYWQSVLG-FYVLCLVSSGGDTLRNVSSTQRYNLKDTV 720
            ..|.|              |::....:|.|:.|.. .::||:|....:    :...|..|| :||
  Rat   577 ITVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPE----IPVKQLKNL-NTV 636

  Fly   721 SNYEPGYYGESMDLLYHRLDLNQGGSAPPKTCRYFRQVATMDAPTLFLSAAAFESPFGFLHNNRP 785
                     .|..||||||||    ...|..|.:|:|:||:::||:.|||.:|.||:.  |.::|
  Rat   637 ---------PSSKLLYHRLDL----LGQPSACLHFKQLATLESPTVMLSAGSFSSPYE--HLSQP 686

  Fly   786 RTQLRHVESIMAYLRDSSGLLANMGLRPSIRHEV----GVLYQAMQQLRRRHQDARGSLRSHVIR 846
            .|: |.||...|||.|::.|:||.||:.|:|:||    .|..:.|.|:.      ..||.::::|
  Rat   687 ETK-RMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQME------MSSLNTYIVR 744

  Fly   847 RYIASVSGVLQLYPGCLLSSSYDPTRRPWFRQAIAQPGKIVSTAPYLDAGGAGYIITIAHTIFEG 911
            ||||:.:|||::|||.|:..::|||||.|:..|:|.||.|..|.||||.|||||::||:|||   
  Rat   745 RYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTI--- 806

  Fly   912 KAHALHSA----QQDRPVAVVALDVPYAFYYRLILEGTPICQLP---HIKCLLFEHEGYLLAHPS 969
                 ||:    .....|||:.:|....::|:::::..|:|...   .|:|.:.|..|||:|||:
  Rat   807 -----HSSSTQLSSGHTVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPT 866

  Fly   970 MLQP---ATLTKNQRRPHEHLTHKESYLANDMLNHGQLVRKLGCASYQNRTLQRYYAFNTSLSSI 1031
            ::.|   |.|.:      :|:||||..:|||:|||...|:|..|.|:.:||:||.|.|||||...
  Rat   867 LVDPKGHAPLEQ------QHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRSYKFNTSLVGD 925

  Fly  1032 LGNVVHGER-TKYAIALIRGSNLFAAVLNSSCDGGAFCPCSTIDRECLNCKRMDQTDCECPCECP 1095
            |.|:|||.. :||.:..|.|:|.|..::|.:||..|||.||.:||.||||.||:|.:||||||||
  Rat   926 LTNLVHGSHCSKYRLTRIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECP 990

  Fly  1096 MVGDSSSPSSLMYFANYTRQFPYCPPPSE--HFIALPPTTQLLSTLPNCPGSAGICETYSTQREC 1158
            :..:..:.:    ..|...:.|.|....|  .:.|:.|..|  ..|..|..|.  |.......:|
  Rat   991 LEVNECTGN----LTNAENRNPSCEVHQEPVTYTAIDPGLQ--DALHQCVNSR--CNQRMESGDC 1047

  Fly  1159 LGVMGCEWCQLDVDGNS-FSTSFCSSQASCFNGVLASLTPYGELDEMELLAAHNPQREQHAYSAF 1222
            .||:.||||.:|.||.: ...|:|:.|..||.|::.:.:||  :|:|..:............:..
  Rat  1048 FGVLDCEWCVVDSDGKTHLDKSYCAPQKECFGGIVGAKSPY--VDDMGAIGDEVITLNMIKSAPV 1110

  Fly  1223 GPLGGAIVVLVMVIGFAIYCYRHNLDAQTQEHFYVDSVQEENYGLPLSRFNFDDCKAHDEPPLGG 1287
            ||:.|.|:..:||:..|:|.|||.:..::.:|....:.||  ..:.:|....|..:..|:     
  Rat  1111 GPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQE--MSVRMSNLENDRDEREDD----- 1168

  Fly  1288 GYDHASAQRQLMHAADISPYHVSSGSSYRR---PPNGESDHGYSTMTPHEDSSDQQCFTLAEPLL 1349
            .::...........|.:...|..|....||   ....|||||||||:|.|||.:..|        
  Rat  1169 SHEDRGIISNTRFIAAVMERHAHSPERRRRYWGRSGTESDHGYSTMSPQEDSENPPC-------- 1225

  Fly  1350 LHDKRHSKSDTMSISTSISSPTNRQQSSSQPNT--------HPYLSNQPTSKTERYKQVQAT 1403
                   .:|.:|....:.:..:.....:.|.|        |.|.|:.||.....:.|...|
  Rat  1226 -------NNDPLSAGVDVGNHDDDLDLDTPPQTAALLSHKFHHYRSHHPTLHHSHHLQAAVT 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 29/121 (24%)
Cache_1 559..627 CDD:280839 23/73 (32%)
Cachd1NP_001178687.1 VWA_N 103..218 CDD:400621 32/184 (17%)
vWFA 227..422 CDD:412136 54/203 (27%)
HK_sensor <463..503 CDD:365792 12/56 (21%)
dCache_1 688..881 CDD:397043 81/213 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340524
Domainoid 1 1.000 433 1.000 Domainoid score I560
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10854
Inparanoid 1 1.050 487 1.000 Inparanoid score I1375
OMA 1 1.010 - - QHG50145
OrthoDB 1 1.010 - - D137593at33208
OrthoFinder 1 1.000 - - FOG0006978
OrthoInspector 1 1.000 - - oto95763
orthoMCL 1 0.900 - - OOG6_109476
Panther 1 1.100 - - LDO PTHR10166
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5065
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.