DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and Cacna2d1

DIOPT Version :10

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:XP_011248046.1 Gene:Cacna2d1 / 12293 MGIID:88295 Length:1110 Species:Mus musculus


Alignment Length:1264 Identity:243/1264 - (19%)
Similarity:419/1264 - (33%) Gaps:416/1264 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAKIQEIFDSMHFSSAKGASNTRQASS-----NDSNVVNPQLQRDLQLFSER-----LSKKIQKA 139
            |.|:||...::    ||.||...|.:.     .|...|.|...|.|...:.|     ||.:.:..
Mouse    37 VDKMQEDLVTL----AKTASGVTQLADIYEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKAL 97

  Fly   140 TYVVLELRELLRYNLTKVWQYSYDDEDDESESEM-------DLEMELEDLHARNTASPTDEHVQL 197
            ..:.:|..::         |.::...:|.:.:|:       ||:.|      ||.:.|..:.:  
Mouse    98 VRLAMEAEKV---------QAAHQWREDFASNEVVYYNAKDDLDPE------RNESEPGSQRI-- 145

  Fly   198 YLNTQIESCQPDYETDLEYGSSSTQSIHYNRQQIQI-----------LNYLKSDDARATFLNENN 251
                     :|.:..|..:|    :.|.|....:.|           ||.|....|.......|.
Mouse   146 ---------KPVFIEDANFG----RQISYQHAAVHIPTDIYEGSTIVLNELNWTSALDEVFKRNR 197

  Fly   252 -----------------ARSLAVNGYISNQLVLLKRRLSRSDAENSNSKP--ISGNHFKHIYFLS 297
                             ||....:.::.|     .|..::.|..:...:|  |.|          
Mouse   198 DEDPTLLWQVFGSATGLARYYPASPWVDN-----SRTPNKIDLYDVRRRPWYIQG---------- 247

  Fly   298 NSDGASASLHFRQLYVSAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVA 362
                             |...|.:|.|:||..::|.....|.::.|.|||:.|.|.|   .|.||
Mouse   248 -----------------AASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDD---FVNVA 292

  Fly   363 S-EANFMSLEAFPAEAGHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLHRLQQSG 426
            | .:|...:..|.    |.:.:..| :|:.:...:|::: |:..|::..||.::||.|       
Mouse   293 SFNSNAQDVSCFQ----HLVQANVR-NKKVLKDAVNNIT-AKGITDYKKGFSFAFEQL------- 344

  Fly   427 MINTAEQPVEFVYITRGLLTNLSDAMA--VLRVVADGQRRLRAPVIINTCAVVLDEKRIMYEKQF 489
                             |..|:|.|..  ::.:..||... ||..|.   |....:|::   :.|
Mouse   345 -----------------LNYNVSRANCNKIIMLFTDGGEE-RAQEIF---AKYNKDKKV---RVF 385

  Fly   490 LNDVASQNYTK--------------YEI-DVASWWPSGQEASELVGRFYVLSKMHAETSLPQTSS 539
            ...|...||.:              ||| .:.:...:.||..:::||..||:...|:        
Mouse   386 TFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIRINTQEYLDVLGRPMVLAGDKAK-------- 442

  Fly   540 RIFGPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPY------------------GVVGVN 586
                            :|....|..|:.::.:.||..:|.:                  ||:||:
Mouse   443 ----------------QVQWTNVYLDALELGLVITGTLPVFNVTGQSENKTNLKNQLILGVMGVD 491

  Fly   587 LYLSDLLEDLLNYPSTTSSAKQGLGYAFLLDRSTGNTLAHP---------AFP-------RPLIQ 635
            :.|.|:......:....:      ||.|.:| ..|..|.||         ..|       ||.:|
Mouse   492 VSLEDIKRLTPRFTLCPN------GYYFAID-PNGYVLLHPNLQPKPIGVGIPTINLRKRRPNVQ 549

  Fly   636 RETSY-PVNIAYL--ENATDFSSHIRDRLLREESGNVTTDVYVGRQ------RLQRTYYWQSVLG 691
            ...|. ||.:.:|  |...:....||::::..|||..|....|..|      :..|||.|..|.|
Mouse   550 NPKSQEPVTLDFLDAELENEIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNG 614

  Fly   692 F-YVLCLV----------SSGGDTLRNVSSTQRYNLKDTVSNYEPGYYGESMDLLYHRLDLNQGG 745
            . |.|.||          :...:|:....| ::..:||: ...:|..:.||            |.
Mouse   615 TDYSLALVLPTYSFYYIKAKLEETITQARS-KKGKMKDS-ETLKPDNFEES------------GY 665

  Fly   746 S--APPKTCRYFRQVATMDAPTLFLSAAAFESPFGFLHNNRPRTQLRHVESIMAYLRDSSGLLAN 808
            :  ||.:.|   ..:...|..|.||  ..|..   |:....|.....:.:.|...|.|:      
Mouse   666 TFIAPREYC---NDLKPSDNNTEFL--LNFNE---FIDRKTPNNPSCNTDLINRILLDA------ 716

  Fly   809 MGLRPSIRHEVGVLYQAMQQLRRRHQDARGSLRSHVIRRYIASVSGVLQLYP---GCLLSSSYDP 870
                       |...:.:|....:.::.:|     |..|::.:..|:.::||   |.....:.:.
Mouse   717 -----------GFTNELVQNYWSKQKNIKG-----VKARFVVTDGGITRVYPKEAGENWQENPET 765

  Fly   871 TRRPWFRQAIAQPGKIVSTAPYLDAGGAGYIITIAHTIFEGKAHALHSAQQDRPVAVVALDVPYA 935
            ....:::::: .....|.||||.:..|.|   .....|...||..|:...:....|||.:.:...
Mouse   766 YEDSFYKRSL-DNDNYVFTAPYFNKSGPG---AYESGIMVSKAVELYIQGKLLKPAVVGIKIDVN 826

  Fly   936 FYYRLILEGT-------PICQLPH----IKCLLFEHEGYLL-----------------AHPSMLQ 972
            .:.....:.:       |:|....    :.|::.:..|:||                 ..|||::
Mouse   827 SWIENFTKTSIRDPCAGPVCDCKRNSDVMDCVILDDGGFLLMANHDDYTNQIGRFFGEIDPSMMR 891

  Fly   973 P---------------ATLTKNQRRPHEHLTHKESYLAN--DMLNHG------------QLVRKL 1008
            .               .::......|.:...|:.:|:.:  |:|..|            ||:..|
Mouse   892 HLVNISLYAFNKSYDYQSVCDPGAAPKQGAGHRSAYVPSIADILQIGWWATAAAWSILQQLLLSL 956

  Fly  1009 G---------------CASYQNR---TLQRYYAFNTSLSSILGNVVHGERTK-YAIALIRGSNLF 1054
            .               .||...:   |.|..|.|.....|..|.:..|..:: :.:..:..:||.
Mouse   957 TFPRLLEAVEMEEDDFTASLSKQSCITEQTQYFFKNDTKSFSGLLDCGNCSRIFHVEKLMNTNLV 1021

  Fly  1055 AAVLNSSCDGGAFCPCSTIDRECLNCKRMDQTDCECPCECPMVGDSSSPSSLMYFANYTRQFPYC 1119
            ..::.|.    ..|||.|  |..:   :.:||. :.|..|.||                :|..|.
Mouse  1022 FIMVESK----GTCPCDT--RLLM---QAEQTS-DGPDPCDMV----------------KQPRYR 1060

  Fly  1120 PPPSEHFIALPPTTQLLSTLPNCPGSAGI 1148
            ..|...|     ...:|....:|.|.:|:
Mouse  1061 KGPDVCF-----DNNVLEDYTDCGGVSGL 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:469594 32/118 (27%)
HK_sensor <867..933 CDD:365792 14/65 (22%)
Cacna2d1XP_011248046.1 VWA_N 104..223 CDD:462464 22/148 (15%)
vWA_VGCC_like 239..417 CDD:238740 53/244 (22%)
dCache_1 <435..>529 CDD:460673 23/124 (19%)
VGCC_alpha2 651..1079 CDD:462488 87/505 (17%)

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