DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16868 and CG42818

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster


Alignment Length:650 Identity:124/650 - (19%)
Similarity:233/650 - (35%) Gaps:158/650 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TSSQHVPLAMANSTSNQVPTDPGFMPLQQSPGSVFFVHHNQQNAMQ-LRHSMEGKLRNIRNTELR 84
            ||.:.|..:.::||:...|:.|   .......:||....::...|: |...::|.:.:..:|:..
  Fly   469 TSPKTVTTSSSHSTTESSPSHP---TTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNI 530

  Fly    85 VAKIQEIFDSMHFS-SAKGASNTRQASSN-----DSNVVNPQLQRDL--QLFSERLSKKIQKATY 141
            .:......||..|. :|....:|.::||.     :|......||..:  .|.:|..|.::.    
  Fly   531 TSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLN---- 591

  Fly   142 VVLELRELLRYNLTKVWQYSYDDE--DDESESEMDLEMELED----LHARNTASPTDEHVQLYLN 200
            ..|.:......||| ...:.:.|:  ||:|:|...|...|.|    |:.:|....|.:       
  Fly   592 TTLSITGTTTPNLT-TSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQ------- 648

  Fly   201 TQIESCQPDYETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLNENNARSLAVNG--YISN 263
                     ..|:..:.||           |.|.|  .:..|.:||   :...|:|::.  |:|.
  Fly   649 ---------LTTESTFNSS-----------INITN--STTVASSTF---STTESMAIHSTPYLST 688

  Fly   264 QLVLLKRRLSRSDAEN------SNSKPISGNHFKHIYFLSNSDGASASLHFRQLYVSAIKQKFVL 322
            :.:.:   ...:|.||      :||..::.|.....|..|.:|..::   :..|..:.....|..
  Fly   689 REITV---FQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTS---YPNLSTTESSPTFDS 747

  Fly   323 FLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMSLEAFPAEAGHGIYSATRA 387
            .:....::.........|..:..:::||:...|:. .|:|.::.        .:....:.|..:|
  Fly   748 TISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQ-KTLADKSK--------GQLSPMLISRIKA 803

  Fly   388 HKEEIIS-FINSLSRAQAFTNHSLGFEYSFELLHRLQQSGMINTAEQPVEFVYITRGLLTNLSDA 451
            ..::|:: .|:|::          |.....|:|        ::|...|.|..       |:|: .
  Fly   804 VLKQIVAGNIDSVN----------GDSTELEIL--------LSTTVNPNEDT-------TDLT-M 842

  Fly   452 MAVLRVVADGQRRLRAPVIINTCAVVLDEKRIMYEKQFLNDVASQNYTKYEIDVASWWPSGQEAS 516
            ..:|::..|.:|...         |:||:     ..|......:||.|.:....::.:.:.|..|
  Fly   843 EKLLKLFDDFERMYN---------VLLDD-----SIQSTTQSTTQNNTIFSTTYSTIFSTTQSIS 893

  Fly   517 ELVGRFYVLSKMHAETSLPQTSSRIFGPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPYG 581
            ......|.|:.....||   |:|....|.......||....|.|:|||.. .:.:::.|      
  Fly   894 TTSPTQYALTSSTPNTS---TTSHSSTPSSINNLRSDESNNHQPIVDAIQ-QLKMALYH------ 948

  Fly   582 VVGVNLY---------LSDLLEDLLNYPSTTSSAKQGLGYAFLLDRSTGNTLAHPAFPRPLIQRE 637
                :.|         :..:|:.|...|               :||.| .|:|.|...|..:.||
  Fly   949 ----DFYAFKKSQEERMEKILQLLNGKP---------------IDRRT-KTIAKPRTIRKKVSRE 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 16/118 (14%)
Cache_1 559..627 CDD:280839 14/76 (18%)
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 25/158 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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