DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and cacna2d4b

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:XP_009296274.2 Gene:cacna2d4b / 100150428 ZFINID:ZDB-GENE-100422-18 Length:1100 Species:Danio rerio


Alignment Length:1117 Identity:201/1117 - (17%)
Similarity:384/1117 - (34%) Gaps:336/1117 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 DLE--MELEDLHARNTASPTDEHVQLYLNTQIESCQPDYET----DLEYG-SSSTQSIHYNRQQI 231
            |:|  :.:|||..........|.::..|.:::.|.:...:|    ||.:. :||.|..::|...:
Zfish    65 DVEPIIRIEDLDGSELVLEFAEEIERMLGSKMRSAKRLADTAEDADLYHEFNSSLQFDYFNALLV 129

  Fly   232 QILNYLKSDDARATF--------LNENNARS-LAVNGYISNQLVLLKRRLSRSDAENSNSKPISG 287
            ..:      |....|        |.|||..| ||||..:|:  :.:...:...|.:..|...:|.
Zfish   130 NTM------DEEGNFIELGGEFPLEENNHFSKLAVNTLMSD--IQVPTNVYNKDPDILNGVYMSE 186

  Fly   288 -------NHFKH------IYFLSN------------SDGASASLHF----RQLYV-SAIKQKFVL 322
                   |:|:.      .||.|.            :..|:..:.|    |..|: :|...|.::
Zfish   187 ALNDIFINNFQKDPTLTWQYFCSQTGFFRLYPGIRWTPDANGVVSFDCRNRNWYIQAATSPKDLV 251

  Fly   323 FLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMSLEAFPAEAGHGIYSATRA 387
            .::||..::......::|..::.:|..|.:.|.|:::......:::.    |...| .:..|...
Zfish   252 IVVDVSGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVSYVE----PCFKG-TLVQADLD 311

  Fly   388 HKEEIISFINSLS-RAQAFTNHSLGFEYSFELLHRLQQSGMINTAEQPVEFVYITRGLLTNLSDA 451
            ::|.....::.|. :.:|....::  :.||.:|...:.:|..:...|.:  :.||.|.   :.|.
Zfish   312 NREHFKLLVDELHVKGEAKVKKAM--KESFRILADARANGQGSLCNQAI--MLITDGA---MEDF 369

  Fly   452 MAVLRVVADGQRRLRAPVII---------NTCAVVLDEKRIMYEKQFLNDVASQNYTKYEIDVAS 507
            .:|........:::|....:         |...:..:.|........|.|| .:|..:|      
Zfish   370 QSVFEEFNWPDKKVRVFTYLIGRDMTFSENVKWIACNNKGFYAHVSTLADV-QENVMEY------ 427

  Fly   508 WWPSGQEASELVGRFYVLSKMHAETSLPQTSSRIFGPLFQERYLSDTLEVHPPVVDADSGDVLVS 572
                          .:|||:       |...:.....::.|.|:...|.....|..:.:..:|..
Zfish   428 --------------LHVLSR-------PMVINHDHDIIWTEAYMDSVLPNTMEVFKSKAHSLLFM 471

  Fly   573 ITHAVPPY-------------GVVGVNLYLSDLLEDLLNYPSTTSSAKQGL-GYAFLLDRSTGNT 623
            .:.|:|.:             ||||.::.|.::::....|       |.|. |||||: .:.|..
Zfish   472 TSVAMPVFSKKKETLSHGILLGVVGTDIPLLEVMKLAPRY-------KLGAHGYAFLI-TNNGYI 528

  Fly   624 LAHPAFPRPL------IQRETSYPVNIAYLENA--TDFSSHIRDRLLREESGNVTTDVYVGRQR- 679
            ||||.. |||      ::.:.:|  |...|..|  .|...::|..:::.|:|.:..||.....: 
Zfish   529 LAHPDL-RPLYYEGKKLKPKPNY--NSVDLSEAEWEDTEDNLRTAMVKGETGTLALDVRTAVDKG 590

  Fly   680 -----LQRTYYWQSV----LGFYVLCLVSSGGDTLRNVSSTQRYNLKDTVSNYEPGYYGESMDLL 735
                 |:..|::.::    ..|.::.....|           :|.....|| .|.|.:       
Zfish   591 KRPLFLKNDYFYTTIDETPFSFGMVLTKGHG-----------QYMFFGNVS-VEEGLH------- 636

  Fly   736 YHRLDLNQGGSAPPKTCRYFRQVATMDAPTLFLSAAAFESPFGFLHNNRPRTQLRHVESIMAYLR 800
                ||.|                    |.|.:   |.|..:.....:....:|..:::::.|| 
Zfish   637 ----DLQQ--------------------PDLTI---AEEWTYCETDIDPQHRKLNQLQAVVRYL- 673

  Fly   801 DSSGLLANMGLRPSIRHEVGVLYQAMQQLRRRHQDA--RGSLRSHVIR--------------RYI 849
                    .|..|.:..:..:|.|.:       .||  ...|.::..|              .::
Zfish   674 --------TGKEPELECDEILLQQVL-------FDAVVTAPLEAYWTRLTLTPPGVDEGMESAFL 723

  Fly   850 ASVSGVLQL--YPGC----------------LLSSSYDPTRRPWFRQAIAQ-PGKIVSTAPY--L 893
            .:.||||::  |.|.                |.:..:.|.   |:|.|... ||:.:...||  :
Zfish   724 GTRSGVLRVIRYTGIEKRLGKKFLTRVDKENLFTVDHFPI---WYRLAAENTPGQFLFYVPYDDI 785

  Fly   894 DAGGAGYIITIAHTIFEGKAHALHSAQQDRPVAVVA-LDVPYAFYYRLI----------LEG-TP 946
            :.|...::...:.|:.|.|..|:..|     :.:.| |||....:..:.          :|| .|
Zfish   786 NKGKNTFVAVTSVTVTERKRTAIAGA-----IGMQASLDVLERIFMSIAKQPNDTDCNDVEGICP 845

  Fly   947 I-CQLPHIKCLLFEHEGYL-----------------------LAHPSMLQPATLTKNQ---RRPH 984
            : |:...:.|.|.:..|::                       |....:.:..||...|   :..|
Zfish   846 LSCESIDLNCYLVDSNGFILMSKDRGDVGRFFGEIDGSVMAQLLKSGLYKRVTLYDYQAMCKTGH 910

  Fly   985 EHLTHKE-----------------SYLANDMLN-------HGQLV--RKLGC-ASYQNRTLQRYY 1022
            .|.:...                 |:....||.       |...|  .|.|. .:::.:.::...
Zfish   911 HHSSGARPLLSPFYALLALIKWWFSHFVMFMLEFNICGLWHNDYVVDAKAGFHTTHKQKKVELMQ 975

  Fly  1023 AFNTSLSSIL--------GNVVHGERTK--YAIALIRGSNLFAAVLNSSCD-GGAFCPCSTIDRE 1076
            ..||.....:        .:::...|.:  :.:..|..|||...|:.:.|| ...:.|.:.:.:|
Zfish   976 PCNTEYPGFMYDKSIRETNSIIKCGRCQKMFVLQQIPNSNLVMLVVQADCDCSRQYAPITLMPKE 1040

  Fly  1077 -----CLNCKRM 1083
                 .:.|.||
Zfish  1041 VKYNATVKCNRM 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 21/123 (17%)
Cache_1 559..627 CDD:280839 20/81 (25%)
cacna2d4bXP_009296274.2 VWA_N 112..222 CDD:312040 24/117 (21%)
vWA_VGCC_like 235..418 CDD:238740 30/194 (15%)
dCache_1 414..>533 CDD:308398 33/154 (21%)
VGCC_alpha2 650..1028 CDD:312092 66/401 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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