DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16868 and cacna2d3

DIOPT Version :9

Sequence 1:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster
Sequence 2:XP_017213852.1 Gene:cacna2d3 / 100148645 ZFINID:ZDB-GENE-030616-133 Length:1083 Species:Danio rerio


Alignment Length:1205 Identity:229/1205 - (19%)
Similarity:407/1205 - (33%) Gaps:386/1205 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GKLRNIRN----TELRVAKIQEIFDSMHFSSAKGASNTRQASSNDSNVVNPQLQRDLQLFSERLS 133
            |::::|.:    ::|...|.:|...|:......||...:..:.|                .|.:.
Zfish    46 GEIKSIASKYSGSQLLQKKYKEYEKSVRIEEIDGAKLVKNLAQN----------------MEEMF 94

  Fly   134 KKIQKATYVVLELRE--LLRYNLTKVWQYSY-------DDEDDESESEMDLEMELEDLHARNTAS 189
            :|..:||..::|..|  .|::......||.|       :.::|.:..|:..|..||         
Zfish    95 RKKAEATRRLVEAAEEAHLQHEENPDLQYEYFNAVLINEVDEDGNSVELGGEFLLE--------- 150

  Fly   190 PTDEHVQLYLNTQIESCQ---------PDYETDLEYGSSSTQSI---HYNRQQIQILNYLKSDDA 242
            |.|....|.:|..:...|         ||....: |.|.:...:   ::.|....|..|..|  |
Zfish   151 PNDHFNNLSVNLSLSVVQVPTNMYNKDPDIVNGV-YWSEALNKVFVDNFRRDPTLIWQYFGS--A 212

  Fly   243 RATFLNENNARSLAVNGYISNQLVLLKRRLSRSDAENSNSKPISGNHFKHIYFLSNSDGASA-SL 306
            :..|                                         ..:..:.:..:..|..| ..
Zfish   213 KGFF-----------------------------------------RQYPGVKWYPDEHGVIAFDC 236

  Fly   307 HFRQLYV-SAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMS- 369
            ..|:.|: :|...|.|:.|:||..::......:::..|..:|..|.|.|..:::....|.:::. 
Zfish   237 RNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVASILDTLGDDDFFNIIAYNQEIHYVEP 301

  Fly   370 -LEAFPAEAGHGIYSATRAHKEEIISFI---------NSLSRAQAFTNHSLGFEYSFELLHRLQQ 424
             |.....:|.    |..:.|.:|.:..:         |:||.|             |.:|:.:.|
Zfish   302 CLNGTLVQAD----STNKDHFKEHLDKLFAKGIGLLGNALSEA-------------FTILNEINQ 349

  Fly   425 SGMINTAEQPVEFVYITRGLLTNLSDAMAVLRVVADGQRRLRA-PVIINTCAVVLDEKRIM---- 484
            :|..::..|.:  :.||.|......|..|....   .:|::|. |.:|...:...|..:.|    
Zfish   350 TGRGSSCSQAI--MLITDGATEMYDDVFAKYNW---PERKVRIFPYLIGRESAFADNLKWMACAN 409

  Fly   485 --YEKQF--LNDVASQNYTKYEIDVASWWPSGQEASELVGRFYVLSKMHAETSLPQTSSRIFGPL 545
              |..|.  |.|| .:|..:|                    .:|:|:       |:........:
Zfish   410 KGYFSQISTLADV-QENVMRY--------------------LHVMSR-------PKVIDHEHDTV 446

  Fly   546 FQERYLSDTL-EVHPPVVDADSGDVLVSITHAVPPY-------------GVVGVNLYLSDLLEDL 596
            :.|.|:...| :.|..:.:....:.:.::  |:|.:             ||.|.::.:.:|::.:
Zfish   447 WTEAYVDSALAQAHKQLGENKGPNPMTTV--AMPVFSTKNETKNQGILLGVAGTDIPIQELMKVI 509

  Fly   597 LNYPSTTSSAKQGL-GYAFLLDRSTGNTLAHPAFPRPLIQ-----RETSY-PVNIAYLENATDFS 654
            ..:       |.|: ||||.: .|.|..|.||.. |||.|     ::.|| .|:::.:| ..|..
Zfish   510 PKH-------KLGIHGYAFAI-TSNGYLLLHPDL-RPLYQEGQKRKKPSYSSVDLSEVE-WEDTE 564

  Fly   655 SHIRDRLLREESGNVTTDVY----VGRQ--RLQRTYYWQSVLG--FYVLCLVSSGGDTLRNVSST 711
            ..:|..::..::|..:.:|.    .|::  .:...||:..:.|  |.|...:|.|..        
Zfish   565 DVLRTAMVNRKTGTFSMEVKRTVDKGKRVLTMHNDYYYTDIKGTPFSVGVALSRGHG-------- 621

  Fly   712 QRYNLKDTVSNYEPGYYG-ESMDLLY--------------HR-------LDLNQGGSAPPKTC-R 753
             :|..|..|| .|.|.:. |..|:..              ||       :.:......|...| |
Zfish   622 -KYFFKGNVS-LEAGLHDLEQPDVALADEWTYCTTEEHHEHRHLTQVQAIKIYMTSRKPHFKCDR 684

  Fly   754 YFRQVATMDAPTLFLSAAAFESPFGFLHNNRPRTQLRHVESIMAYLRDSSGLLANMGLRPSIRHE 818
            ...|....||    :..|..|:.:..|..|:.....:.||  :|:|...:||....         
Zfish   685 ELIQQVLFDA----VVTAPVEAYWTGLALNKSENSDKGVE--IAFLGTRTGLSRTN--------- 734

  Fly   819 VGVLYQAMQQLRRRH----QDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRPWFRQA 879
               |:...:||..|.    :|..|                        :.::.:.|.   |:::|
Zfish   735 ---LFVVPEQLTNRDFLTAEDKEG------------------------VFNADHFPL---WYKRA 769

  Fly   880 IAQ-PGKIVSTAPYLDAGGAGYIITIAHTIFEGKAHALHSAQQDRPVAVVALDVPYAFYYRLI-- 941
            ..| ||..|.:.|: .:||....:.:|.|..:     |...::...||.|.:.:...|:.|..  
Zfish   770 AEQVPGTFVYSIPF-SSGGENKSVVLASTAIQ-----LLDDRKSPIVAAVGIQMKLEFFQRKFWT 828

  Fly   942 -------LEG--TPICQLPHIKCLLFEHEGYLLAHPSMLQPATLTKNQRRPHEHLTHKESYLAND 997
                   |:|  |..|....|||.|.::.|::|          ::::..:.:......|..:.|.
Zfish   829 ASRQCNALDGKCTISCDNEDIKCYLIDNNGFIL----------VSEDTSQTNLFFGKVEGAVMNK 883

  Fly   998 MLNHGQLVRKLGCASYQ------------NRTL-------------------------------- 1018
            :|..|.. :|:....||            .|||                                
Zfish   884 LLLMGSF-KKINLYDYQALCKEYAGSSDSARTLLDPFTTVKWLLTELVIFLLEFNLYSWWNCDST 947

  Fly  1019 ------QR---------YYAF--NTSLSSILGNV-VHGERTKYAIALIRGSNLFAAVLNSSCDGG 1065
                  ||         |.||  ..::....||: .:|....:.|..|..||||..|:.:.||.|
Zfish   948 VKAQRSQRTMMVPCDTEYPAFVSERTIKETTGNIDCNGCIRTFVIQQIPSSNLFMVVVENKCDCG 1012

  Fly  1066 AFCPCS-----TIDRECLNCKRMD-QTDCECPCEC 1094
            :..|.:     .|..|.|.|.|:. |.|...|..|
Zfish  1013 SALPVTMEPIEIIYNESLKCDRLKFQKDRRRPQSC 1047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 26/129 (20%)
Cache_1 559..627 CDD:280839 15/81 (19%)
cacna2d3XP_017213852.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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