DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpcp1 and SCaMC

DIOPT Version :10

Sequence 1:NP_611468.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster


Alignment Length:299 Identity:71/299 - (23%)
Similarity:124/299 - (41%) Gaps:52/299 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GLGGIISCGSTHTMVVPLDLVKCRLQVDPAKYKSVFTGFRISLAEEGVRGLAKGWAPTFIGYSMQ 143
            |:.|.:|    .|...|||.:|..|||...: ..:.....|.|.|.|.|.:.:|.....:..:.:
  Fly   293 GIAGAVS----RTCTAPLDRIKVYLQVQTQR-MGISECMHIMLNEGGSRSMWRGNGINVLKIAPE 352

  Fly   144 GLCKFGLYEVFKK-VYGDAIGEENAFLYRTGLYLAASASAEFFADIALAPMEAAKVK--IQTTPG 205
            ...||..||..|: :.||....:.:.:.|    ..|.|:|...:...:.|||..|.:  ::.|..
  Fly   353 TAFKFAAYEQMKRLIRGDDGSRQMSIVER----FYAGAAAGGISQTIIYPMEVLKTRLALRRTGQ 413

  Fly   206 FAKTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLYKYVVPKPRADCTKG 270
            :| .:.:|..|:..||||.:||:|.||..:..:||..:..|.:|   .|..:|:     |:....
  Fly   414 YA-GIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYE---TLKRRYI-----ANHDNN 469

  Fly   271 EQ--LVVTFAAGYIAGVFCAIVSHPADTVVSKLNQAKGASAL----------------------- 310
            ||  .:|..|.|..:.....:.|:|...|.::| ||:.|..:                       
  Fly   470 EQPSFLVLLACGSTSSTLGQLCSYPLALVRTRL-QAQAAETIANQKRKTQIPLKSSDAHSGEETM 533

  Fly   311 -----DVAKQLGWSGLWGGLVPRIVMIGTLTAAQWFIYD 344
                 .:.:|.|.:||:.|:.|..:.:....:..:.:|:
  Fly   534 TGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYE 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp1NP_611468.1 Mito_carr 71..160 CDD:395101 22/81 (27%)
Mito_carr <188..258 CDD:395101 22/71 (31%)
Mito_carr 273..350 CDD:395101 17/100 (17%)
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 70/284 (25%)
Blue background indicates that the domain is not in the aligned region.

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