DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mpcp1 and Tyler

DIOPT Version :9

Sequence 1:NP_001286628.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:388 Identity:69/388 - (17%)
Similarity:125/388 - (32%) Gaps:139/388 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LGGIISCGSTHTMVVPLDLVKCRLQV--------------------------------------D 106
            :||:|    |..:|.||::||.|:|.                                      |
  Fly    54 VGGLI----TTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVPKPGRD 114

  Fly   107 PAK---YKSVFTGFRISLAEEGVRGLAKGWAPTFIGYSMQGLCKFGLYEVFKK----VY------ 158
            |..   .:.....|...:...|..||..|.:||.:......:..|..||..|.    :|      
  Fly   115 PQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQKF 179

  Fly   159 --------------GDAIGEENAFLYRTGLYLAASASAEFFADI------------ALAPMEAAK 197
                          ||.:.:....:..:.....::||..::..:            |:.|:|..:
  Fly   180 EESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTIVVTAITPIEMVR 244

  Fly   198 VKIQTTPGFAKTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLYKYVVPK 262
            :|:|:.......|...|..:..|.|:...::|..|..||..|::...:|.:|   .:...:.|.:
  Fly   245 IKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYE---AIKRAFSVTE 306

  Fly   263 PRADCTKGEQLVVTFAAGYIAGVFCAIVSHPADTVVS-------------KLNQAKGA------- 307
            |        ..:.:|..|.|:|.....|:.|.|.:.:             ::....||       
  Fly   307 P--------TFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGAGTGTGAG 363

  Fly   308 ---------------SALDVAKQL----GWSGLWGGLVPRI--------VMIGTLTAAQWFIY 343
                           |.|...:|:    |..||:.|::||:        :||.|...::.|.:
  Fly   364 ARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYSKSFFF 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp1NP_001286628.1 Mito_carr 71..160 CDD:278578 25/144 (17%)
Mito_carr <188..258 CDD:278578 16/81 (20%)
Mito_carr 273..350 CDD:278578 22/118 (19%)
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 24/120 (20%)
Mito_carr 216..302 CDD:278578 17/88 (19%)
Mito_carr 306..429 CDD:278578 23/129 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441444
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.