DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpcp1 and colt

DIOPT Version :10

Sequence 1:NP_611468.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:302 Identity:80/302 - (26%)
Similarity:131/302 - (43%) Gaps:37/302 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 FLLCGLGGIISCGSTHTMVVPLDLVKCRLQVDPAK-------YKSVFTGFRISLAEEGVRGLAKG 132
            ||..|.|||.:..|.|    |||.:|.|||..|..       |:..|.....::..||||||.||
  Fly    19 FLTGGFGGICNVLSGH----PLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKG 79

  Fly   133 WAPTFIGYS-MQGLCKFGLYEVFKKVYGDAIGEENAFLYRTGLYLAASASAEFFADIALAPMEAA 196
            .:....|.: :..:| |..|.:.|::  ...||:....| ..:::|.|.|. .|:.:.:||.|..
  Fly    80 MSAPLTGVAPIFAMC-FAGYALGKRL--QQR
GEDAKLTY-PQIFVAGSFSG-LFSTLIMAPGERI 139

  Fly   197 KVKIQTTPGFA-----KTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLY 256
            ||.:||..|..     ..:.:...|:..:.|:.:.:||.....:|.:|...:.|..:|...:   
  Fly   140 KVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQD--- 201

  Fly   257 KYVVPKPRADCTKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQA------KGASAL--DVA 313
               |.|.::: |.......|..||.:||:...|:..|||.:.|:|..|      .|..::  |:.
  Fly   202 ---V
AKSKSE-TGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLI 262

  Fly   314 KQLGWSGLWGGLVPRIVMIGTLTAAQWFIYDAVKVFLRMPRP 355
            .:.|...|:.|:.|.::......||.:|..:....|..:..|
  Fly   263 VKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFNIVAP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp1NP_611468.1 Mito_carr 71..160 CDD:395101 31/92 (34%)
Mito_carr <188..258 CDD:395101 16/74 (22%)
Mito_carr 273..350 CDD:395101 21/84 (25%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 31/94 (33%)
Mito_carr 112..202 CDD:395101 21/97 (22%)
Mito_carr 210..299 CDD:395101 21/88 (24%)

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