DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpcp1 and Rim2

DIOPT Version :10

Sequence 1:NP_611468.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster


Alignment Length:363 Identity:85/363 - (23%)
Similarity:145/363 - (39%) Gaps:78/363 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SAPTSTAVVTPTLKDV-----------APRQLTRNHNIAAAAVAEGDSCEF-------------- 69
            ||.|..||||..|:.|           .|.:|..|   |....|.|...|.              
  Fly    17 SAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAEN---AGGGPANGGQSELLRPEQRRKLSTTIL 78

  Fly    70 -GSNHYFLLCGLGGIIS---CGSTHTMVVPLDLVKCRLQVDPAKYKSVFTGFRISLAEEGVRGLA 130
             ..:...::.|:..|::   ||.:.|....:.:|:|               .|..:..||.|.|.
  Fly    79 RNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQC---------------LRHIVQNEGPRALF 128

  Fly   131 KGWAPTFIGYSMQGLCKFGLYEVFKKVYGDAIGEENAFLYRTG--LYLAASASAEFFADIALAPM 193
            ||..|..:|.:......|..|...|... :::|    |:.|..  :::.::|||.|.:..|..|:
  Fly   129 KGLGPNLVGVAPSRAIYFCTYSQTKNTL-NSLG----FVERDSPLVHIMSAASAGFVSSTATNPI 188

  Fly   194 EAAKVKIQT--TPGFAKTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLY 256
            ...|.::|.  ......|:|:.:.::.||.||.|||||:...:. .|..||:.|        ::|
  Fly   189 WFVKTRMQLDYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYF-GICETMVHF--------VIY 244

  Fly   257 KYVVPK------PRADCTKGEQLVVTF-AAGYIAGVFCAIVSHPADTVVSKLNQAKG------AS 308
            :::..|      .|...|||.:..:.| .||.::....:.:::|.:...::|.:...      .:
  Fly   245 EFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQT 309

  Fly   309 ALDVAKQLGWSGLWGGLVPRIVMIGTLTAAQWFIYDAV 346
            ...|.|:.|.:||:.||..::|.....||.....|:||
  Fly   310 LHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAV 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mpcp1NP_611468.1 Mito_carr 71..160 CDD:395101 19/91 (21%)
Mito_carr <188..258 CDD:395101 20/71 (28%)
Mito_carr 273..350 CDD:395101 18/81 (22%)
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 35/156 (22%)
Mito_carr 163..253 CDD:395101 26/98 (27%)
Mito_carr 268..355 CDD:395101 18/80 (23%)

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