DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and dbpA

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_415859.1 Gene:dbpA / 947153 ECOCYCID:EG10210 Length:457 Species:Escherichia coli


Alignment Length:524 Identity:136/524 - (25%)
Similarity:220/524 - (41%) Gaps:149/524 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 MSAWNGLGV-PASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAG 277
            |:|::.|.| |.:.|..|.|.|:.|.|.:||..|||.:.| ||:...|:||||||.|||:.:|  
E. coli     1 MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAG-KDVRVQAKTGSGKTAAFGLGLL-- 62

  Fly   278 IMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLY 342
                                                 :::|               |...||  .
E. coli    63 -------------------------------------QQID---------------ASLFQT--Q 73

  Fly   343 GLVLTPTRELAVQVKNHLVAAAKY-TGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYA 406
            .|||.||||||.||...|...|:: ...::..:.||.....|...|:..|.|:|||||||.:   
E. coli    74 ALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLD--- 135

  Fly   407 QGNRHLGK----IEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTLV 467
                ||.|    ::.::.||:||.|||::.|..:.:..:::...:      .||..::|||.   
E. coli   136 ----HLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPA------SRQTLLFSATW--- 187

  Fly   468 HDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSS-------QQTAQTLTESR 525
                           |:.: ..:..:::        ..|..::|.|:       ||..:|.::.:
E. coli   188 ---------------PEAI-AAISGRVQ--------RDPLAIEIDSTDALPPIEQQFYETSSKGK 228

  Fly   526 LLCPIDHKDYHLYYFIQRH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLE 589
            :  |:      |...:..| |...:||||:....:.:......:..:.|.||.::.|:.|.:.|.
E. coli   229 I--PL------LQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLV 285

  Fly   590 RFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEV 654
            ||.:....:|:|||||||||||.::|.|:::::....|.:|||.||||||...|:.:.|..|.|.
E. coli   286 RFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEA 350

  Fly   655 KSYVKLYKTLERTEDLPLFPILERFMGAVRERVNLARDLDKEELKLKRVQSERGWMKKHAEEMDM 719
                                          :|.|:..|:.:.:|..:...:........||...:
E. coli   351 ------------------------------QRANIISDMLQIKLNWQTPPANSSIATLEAEMATL 385

  Fly   720 IIDG 723
            .|||
E. coli   386 CIDG 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 73/288 (25%)
SF2_C_DEAD 521..648 CDD:350174 41/127 (32%)
dbpANP_415859.1 PRK11776 1..457 CDD:236977 136/524 (26%)

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