DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and AT3G16840

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001326753.1 Gene:AT3G16840 / 820937 AraportID:AT3G16840 Length:827 Species:Arabidopsis thaliana


Alignment Length:850 Identity:272/850 - (32%)
Similarity:429/850 - (50%) Gaps:154/850 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KEPALSKAENWQKVKIK-------------------GHVISDDGGGFE-----------GLIGLE 54
            ||.:|.|..|.:..|.|                   |.  .|:|..|.           |.:.||
plant     6 KESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGE--DDEGESFSTLFSGSGQLDGGFLSLE 68

  Fly    55 VLKDYDASL-VKSSQKRTTSR--NPDRERKLKKKKRKVSKGDE-EESSESSSESESEDEVAVAAR 115
            .:.:.|..| :.:.:...|.|  :|:.:....:...::.:|:| ||..|...:.:.||:    ..
plant    69 EIDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEGEEAEEDGEGRDDEDDEDD----EE 129

  Fly   116 TSKKARLAERHAQKMQKLREKREKRKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDE 180
            |.||         |.:|.:..:||:||.:|:|:.|..|...::::|...:.|             
plant   130 TRKK---------KEKKAKRNKEKKKEKKKKKQKKINEAAKNQDASAAVSCD------------- 172

  Fly   181 EEVVKAEDSADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALT 245
                 .:|:.::|...:|..||           .|||:.:.:...:::::....||.||:||...
plant   173 -----GDDTVEEQVEEEEIPPE-----------FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKAC 221

  Fly   246 LPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEP-AADEHE 309
            ...|.:..||::||||||||||||||:|:|..:::.:::     :.|...:||::.:. |||.: 
plant   222 FNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREK-----VGKLYALKGEEAQKYAADGY- 280

  Fly   310 LTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAI 374
                                           |..|::|||||||:||..||..|||...::|..|
plant   281 -------------------------------LRALIITPTRELALQVTEHLENAAKNLSVKVVPI 314

  Fly   375 FGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELR 439
            .||:...||||.|::.|:||||||||||||.:.|.:||.::..:||.|:||.|||||:|||.||:
plant   315 VGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQ 379

  Fly   440 SLLKVL----NSDEQK--------------KHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFV 486
            |:|.:|    ..:|.|              |.:||.||:|||:.|..|....: ||...|..:..
plant   380 SILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKL-KRGSSKSKQSS 443

  Fly   487 KQTVDQKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRH-PGRTI 549
            ...|: .||.|.|..|: ....|:|:|::...|..:.||.:.|....||.:|||.:..| .||||
plant   444 SGEVN-SIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTI 507

  Fly   550 VFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNV 614
            |||.|:..::.::.|..:|..:...|.:.|.|:.|||:::|||.|..|:|||||:.|||:||.||
plant   508 VFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNV 572

  Fly   615 EHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILERF 679
            ..:|||::|.::|.||||.||||||...|.::..:||.|...:..|.|:.. .|.:.:||:...:
plant   573 RTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCKSFS-MESVKIFPLDNSY 636

  Fly   680 MGAVRERVNLARDLDKEELKLKRVQSERGWMKKHAEEMDMIIDGYNDESGSDQDEDPFVIERRRN 744
            |.|||:|:.|||.:.:.|.|..|..::|.|:|||||.|::.:|   ||...::..|. |.:|:..
plant   637 MPAVRKRLYLARQIYEIERKGSRENADRTWLKKHAESMELELD---DEESEEERVDN-VRQRKAT 697

  Fly   745 RLRVETVRAQLNALLAQPIFPRGFSFKYPNSEAAQLATSHTQSAVETMKAAIEDQKQAKK----D 805
            ..|:..::.:|:.||:.|:.|:.||.:|       .|.....:.::.....::.||||:.    |
plant   698 SARLNKLKEELSTLLSHPMQPKKFSGRY-------FAGVGVSTLMQNQFVELKKQKQAQMQIGGD 755

  Fly   806 RNKRK 810
            ..:||
plant   756 IKRRK 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 112/303 (37%)
SF2_C_DEAD 521..648 CDD:350174 58/127 (46%)
AT3G16840NP_001326753.1 SrmB 194..615 CDD:440279 176/459 (38%)

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