DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and AT2G28600

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_180427.1 Gene:AT2G28600 / 817408 AraportID:AT2G28600 Length:502 Species:Arabidopsis thaliana


Alignment Length:639 Identity:128/639 - (20%)
Similarity:233/639 - (36%) Gaps:206/639 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LKKKKRKVSKGDEEESSESSSESESEDEVAVAAR-----TSKKARLAERHAQ---------KMQK 132
            :::||.||::         ...|...|...|:||     .:||.|.:.:.:.         .::.
plant     8 VQRKKNKVTR---------KKMSRKNDTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLPTLED 63

  Fly   133 LREKREKRKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTD 197
            ...:|:.:.::.|:||.|.|                               ||         |.:
plant    64 PFNERQGKADITKKKKKKKK-------------------------------VK---------SRE 88

  Fly   198 EEAPELVPISTGEAEDMSAWNGLGVPASILRALG--EQGFKTPTQIQALTLPAAIHGKKDILGAA 260
            ::.|.  |:|....|.|.     |.|..::..|.  |..|                 :|||..:.
plant    89 DKKPS--PMSIEGVEKMD-----GPPKFLMLNLNEIESSF-----------------RKDITYSE 129

  Fly   261 ETGSGK-TLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDH-VSGA 323
            :..... |.::||..        .:...||            ....|...::...|::.. ||.|
plant   130 QHDKSLFTSSWGIEF--------WKCYSSG------------NDILDTSGMSSTVEQIAWIVSTA 174

  Fly   324 SD-----EESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQ 383
            :|     |:.:.||:.:.:....:.|.|.|::..|.||:: :..|.|..||...::..|..:..|
plant   175 ADAIARREKDEVEEEEELLGNSPFLLYLVPSQSKASQVRS-VCKALKGIGIHTVSLHQGAPLDHQ 238

  Fly   384 ERVLRQC-PDIVVATPGRLWELYA-QGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLLKVLN 446
            ...|:.. |:.:||||.||.|:.. :|    ..|.:||.|||||...:...|:...::|:.:.::
plant   239 ISGLKSVEPEFIVATPERLLEIVTLKG----VDISNVSLLVIDELGSLCSGGYLNAVKSIKQAIS 299

  Fly   447 SDEQKKHQRQNFVYSATLTLVHDLPDHM--------QKRNVGKRPKFVKQTV------DQKIESL 497
            |    |||...|..|.:.:::..:...:        ...:|..:...:.|||      ::|::..
plant   300 S----KHQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKF 360

  Fly   498 IEELGISQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDC----V 558
            .:.|..|..|::.|.:.:::.:.:.....|                   :.|....|.|.    |
plant   361 AKHLDSSSSKLIYIVTKEESFKKIMAILKL-------------------KGISVSTSSDSKLSEV 406

  Fly   559 KRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVP 623
            |:          :..|: |::|..::| :....|||.|.||  .|.      .|::|  |:.|: 
plant   407 KK----------SRKPV-AHLIDFEQL-DTTVMRDSETVLL--PDF------FPSIE--IYTQI- 448

  Fly   624 RTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILE 677
            .||         .||.:.||:...::...:..||          :..||..:||
plant   449 LTS---------MARESAHGVLHSYITEKDAASY----------QAGPLVNVLE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 66/308 (21%)
SF2_C_DEAD 521..648 CDD:350174 27/130 (21%)
AT2G28600NP_180427.1 DEAD-like_helicase_N <194..322 CDD:475120 38/136 (28%)

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