DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9143 and Rs1

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster


Alignment Length:865 Identity:223/865 - (25%)
Similarity:351/865 - (40%) Gaps:273/865 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SKAE-NWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDA----SLVKSSQKRTTSRNPDR-ERKLK 83
            |.|| .:|..|::...:::...|||   .:..:|:|:.    .|:|..:::..::..|: ..:|:
  Fly    26 SDAEVEYQPTKLRHKKVTEFEKGFE---FVSSVKEYNQDTWDDLMKYVKRKARTKTDDKIAARLQ 87

  Fly    84 KKKRKVSKGDEEESSESSSESE---SEDEVAVAARTSKKARLAERHAQKMQKLREKREKRKELRK 145
            |:     .|.|..::|.|..||   ||||:              :|..  .:||||    ||.:|
  Fly    88 KR-----GGAEAVAAEQSDGSEIDLSEDEL--------------KHDN--LRLREK----KESKK 127

  Fly   146 QKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPELVPISTGE 210
            :||..|:|::                      :||.|.::..|:.:..                 
  Fly   128 KKKKAGEEDE----------------------EDEGEKMQFADTVEAN----------------- 153

  Fly   211 AEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPML 275
             |.::::..:.:...::||:|..|:..||.|||.|:|.|:.| :||.|.|.||:|||.|:.:|.|
  Fly   154 -EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLG-RDICGCAATGTGKTAAYMLPTL 216

  Fly   276 AGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTP 340
            ..::.....|                                              :...||   
  Fly   217 ERLLYRPLNN----------------------------------------------KAITRV--- 232

  Fly   341 LYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELY 405
               |||.|||||..||........::|.|.|....|||.|..||.||||.||||:||||||.:  
  Fly   233 ---LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLID-- 292

  Fly   406 AQGNRHLGK-----IEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLT 465
                 |:..     ::.:..|::||.|||:::...|:::   :::||..:   .||..::|||::
  Fly   293 -----HIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMK---EIINSCCK---TRQTMLFSATMS 346

  Fly   466 LVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQTLTE------- 523
                                 :|..|      :..:.:.:|..|.:.::||.|..|.:       
  Fly   347 ---------------------EQVKD------LAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIRE 384

  Fly   524 ----------SRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHAN 578
                      :.|:|...|.  |...|:|....           ..||..|.|||......||.|
  Fly   385 DKEGDREPILASLICRTFHD--HCMVFVQTKKQ-----------AHRLHILLGLLGVRAGELHGN 436

  Fly   579 MIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHG 643
            :.|:|||::|::|::....:|||||||||||||..|:.||::.:|.|:|:|:||.||||||.:.|
  Fly   437 LTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAG 501

  Fly   644 ITVMFMEPGEVKSYVKLYKTLERTEDLPLFP--ILERFMG-----------------AVRERVNL 689
            |:|......|.|....:.|..|.|....:.|  |:|::..                 |.|:....
  Fly   502 ISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKT 566

  Fly   690 ARDLDKEELK-LKRVQSERGWM--KKHAE-EMDMIIDGYNDES--------------------GS 730
            .:.|.|.|.| |.:....|||.  |:..| |.|.:.....||.                    |.
  Fly   567 EQQLSKTERKLLGQTNERRGWFQTKQQREAEKDRLALTTGDEDKASGGKGKGKTAGKRKRPEYGG 631

  Fly   731 DQDEDPFV--IERRRNRLRVETVRAQLNALLAQPIFPRGFSFKYPNSEAAQLATSHTQSAVETMK 793
            |.::.|.|  :|.:||:.:.|..|.                 |.|.    |||.......:|  |
  Fly   632 DGEDGPPVKDLEAKRNKKKKEEPRK-----------------KTPE----QLAKERAMKEIE--K 673

  Fly   794 AAIEDQKQAKKDRNKRKRNA 813
            .::...|.||..:...|..|
  Fly   674 VSLVRAKMAKLRKRPGKLGA 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 16/65 (25%)
SrmB 201..747 CDD:223587 168/612 (27%)
P-loop_NTPase 217..465 CDD:304359 76/252 (30%)
HELICc 531..648 CDD:238034 50/116 (43%)
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 145/512 (28%)
DEADc 159..364 CDD:238167 79/297 (27%)
Helicase_C 393..498 CDD:278689 48/117 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451536
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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