DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and pit

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:769 Identity:193/769 - (25%)
Similarity:310/769 - (40%) Gaps:222/769 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RERKLKKK--KRKVSKGDEEESSESSSESESEDEVAVAARTSKK-ARLAERHAQKMQ-------- 131
            ||:.|.||  ||:..|.:..:...:.:..:.|.......:.||| .:|:::|..|.:        
  Fly     4 REKLLMKKIVKREKMKKELSQKKGNKNAQKQEPPKQNGNKPSKKPEKLSKKHVAKDEDDDLEEDF 68

  Fly   132 ---KLREKREKRKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQ 193
               .|.:|:::::..:||:......:..|::...|..||..:.|......|||:|....:..|||
  Fly    69 QEAPLPKKKQQKQPPKKQQIQVANSDSESDDDEQEDEADEDSDLDEVAEVDEEDVDSGSEDDDQQ 133

  Fly   194 ESTDEEAP------ELVP-------------------------ISTGEAEDMSAWNGLG-VPASI 226
            |..|||.|      :|:|                         :...:::|.|..:..| |..:.
  Fly   134 EDEDEEEPVPAKKTKLLPNKSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEAT 198

  Fly   227 LRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELK--QRNIRSG 289
            |||:.|.||...|:||:.:|...:.| :|::|||:|||||||||.||.:..|.:|:  .|| .:|
  Fly   199 LRAIKEMGFTEMTEIQSKSLTPLLKG-RDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRN-GTG 261

  Fly   290 IRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAV 354
            :                                                     ::::|||||::
  Fly   262 V-----------------------------------------------------IIISPTRELSM 273

  Fly   355 Q---VKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIE 416
            |   |...|:|...:|   ...:.||.....:...|.:..:|:|||||||.:       ||....
  Fly   274 QTFGVLKELMAHHHHT---YGLVMGGSNRQVESEKLGKGINILVATPGRLLD-------HLQNSP 328

  Fly   417 DVSF-----LVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQK 476
            |..:     |:|||.||::|.|..|||:.::.:|      ..:||..::|||.|           
  Fly   329 DFLYKNLQCLIIDEVDRILEIGFEEELKQIINLL------PKRRQTMLFSATQT----------- 376

  Fly   477 RNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQT--LTESRLLCPIDHKDYHLYY 539
                           .:||:|.:....|:|..|.:..:|.||..  |.:..::||.:.:...|:.
  Fly   377 ---------------ARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFT 426

  Fly   540 FIQRH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATD 603
            |:::: ..:.:||.:|...||....||..:|.....:|....|.:|.....:|.::.:|:|:.||
  Fly   427 FLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTD 491

  Fly   604 VAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTAR-ANKHGITVMFMEPGEV------------- 654
            |||||||||.|:.::.|..|.....|:||.||||| :...|..::.|.|.|:             
  Fly   492 VAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPL 556

  Fly   655 -----------------------------------KSYVKLY-----KTLERTEDLPLFPILERF 679
                                               ||||:.|     |.:.....|.|..:.:.|
  Fly   557 NEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSF 621

  Fly   680 MGAVRERVNLARDLDKEELKLKRVQSER-GWMKKHAEEMDMIIDGYNDESGSDQ 732
            ...|...|:|.....|.|...|||.... |:.||           .|:.|.|.|
  Fly   622 GFLVPPVVDLKVGAAKRERPEKRVGGGGFGFYKK-----------MNEGSASKQ 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 78/293 (27%)
SF2_C_DEAD 521..648 CDD:350174 42/128 (33%)
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 78/293 (27%)
SF2_C_DEAD 408..537 CDD:350174 42/128 (33%)
DUF4217 570..627 CDD:464056 10/56 (18%)

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